Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC098831.1-202ENST00000438821 336 ntBASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 AC136632.2-201ENST00000512891 861 ntBASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 IGHV3-22-201ENST00000520721 359 ntBASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 AP002414.3-201ENST00000589352 1468 ntBASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 AC073621.1-201ENST00000392730 636 ntBASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 LINC00982-205ENST00000420957 435 ntBASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 AL356488.2-201ENST00000602755 427 ntBASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 LYSMD4-203ENST00000378904 2122 ntBASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 AC084018.2-201ENST00000613093 2607 ntBASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PCDH20Q8N6Y1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 AL135999.2-201ENST00000622438 1686 ntBASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 ELK2BP-201ENST00000415014 1224 ntBASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 AP000347.1-202ENST00000435868 847 ntBASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 AL353135.1-201ENST00000606729 504 ntBASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 AC005593.1-201ENST00000624894 515 ntBASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms