Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL23A1Q86Y22 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 RPL37AP1-201ENST00000412502 279 ntBASIC21.33■■□□□ 1.01
COL23A1Q86Y22 AP006294.1-201ENST00000415407 339 ntBASIC21.33■■□□□ 1.01
COL23A1Q86Y22 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 KRT17P8-201ENST00000540749 863 ntBASIC21.33■■□□□ 1.01
COL23A1Q86Y22 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.33■■□□□ 1.01
COL23A1Q86Y22 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL23A1Q86Y22 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.33■■□□□ 1
COL23A1Q86Y22 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL23A1Q86Y22 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.33■■□□□ 1
COL23A1Q86Y22 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL23A1Q86Y22 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL23A1Q86Y22 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.32■■□□□ 1
COL23A1Q86Y22 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
COL23A1Q86Y22 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.32■■□□□ 1
COL23A1Q86Y22 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.32■■□□□ 1
COL23A1Q86Y22 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL23A1Q86Y22 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
COL23A1Q86Y22 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL23A1Q86Y22 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.32■■□□□ 1
COL23A1Q86Y22 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.32■■□□□ 1
COL23A1Q86Y22 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.32■■□□□ 1
COL23A1Q86Y22 AC022210.1-201ENST00000449856 793 ntBASIC21.32■■□□□ 1
COL23A1Q86Y22 AC092658.1-201ENST00000505836 891 ntBASIC21.32■■□□□ 1
COL23A1Q86Y22 AC105233.2-201ENST00000523697 349 ntBASIC21.32■■□□□ 1
COL23A1Q86Y22 AF228730.5-201ENST00000530288 346 ntBASIC21.32■■□□□ 1
COL23A1Q86Y22 AC106886.1-201ENST00000568660 600 ntBASIC21.32■■□□□ 1
COL23A1Q86Y22 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.32■■□□□ 1
COL23A1Q86Y22 CHCHD2P3-201ENST00000603038 451 ntBASIC21.32■■□□□ 1
COL23A1Q86Y22 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.32■■□□□ 1
COL23A1Q86Y22 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.32■■□□□ 1
COL23A1Q86Y22 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL23A1Q86Y22 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
COL23A1Q86Y22 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.32■■□□□ 1
COL23A1Q86Y22 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL23A1Q86Y22 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.32■■□□□ 1
COL23A1Q86Y22 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.32■■□□□ 1
COL23A1Q86Y22 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL23A1Q86Y22 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
COL23A1Q86Y22 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
COL23A1Q86Y22 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.31■■□□□ 1
COL23A1Q86Y22 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.31■■□□□ 1
COL23A1Q86Y22 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.31■■□□□ 1
COL23A1Q86Y22 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.31■■□□□ 1
COL23A1Q86Y22 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.31■■□□□ 1
COL23A1Q86Y22 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.31■■□□□ 1
COL23A1Q86Y22 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.31■■□□□ 1
COL23A1Q86Y22 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.31■■□□□ 1
COL23A1Q86Y22 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms