Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 CICP6-201ENST00000457191 2729 ntBASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 AC064862.7-201ENST00000604520 867 ntBASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 REXO1L6P-202ENST00000619970 1078 ntBASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.94■□□□□ 0.14
CHMP1BQ7LBR1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 AL121912.1-201ENST00000603683 238 ntBASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 INTS4P1-201ENST00000438455 1935 ntBASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CHMP1BQ7LBR1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms