Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 AC007541.1-201ENST00000570282 1469 ntBASIC14.17□□□□□ -0.14
VPS13CQ709C8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13CQ709C8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS13CQ709C8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 AKAP8P1-201ENST00000434743 1349 ntBASIC14.16□□□□□ -0.14
VPS13CQ709C8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 AP3S2-216ENST00000617003 1561 ntBASIC14.16□□□□□ -0.14
VPS13CQ709C8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 GIMAP3P-201ENST00000495150 836 ntBASIC14.16□□□□□ -0.14
VPS13CQ709C8 AC119751.2-201ENST00000504529 210 ntBASIC14.16□□□□□ -0.14
VPS13CQ709C8 API5-211ENST00000534695 560 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13CQ709C8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.16□□□□□ -0.14
VPS13CQ709C8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 PP12613-201ENST00000424958 2230 ntBASIC14.15□□□□□ -0.14
VPS13CQ709C8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms