Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SP6Q3SY56 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.33□□□□□ -0.12
SP6Q3SY56 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SP6Q3SY56 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.33□□□□□ -0.12
SP6Q3SY56 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SP6Q3SY56 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SP6Q3SY56 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.33□□□□□ -0.12
SP6Q3SY56 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 CYP2D8P-201ENST00000433633 1490 ntBASIC14.32□□□□□ -0.12
SP6Q3SY56 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SP6Q3SY56 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.32□□□□□ -0.12
SP6Q3SY56 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SP6Q3SY56 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.32□□□□□ -0.12
SP6Q3SY56 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.32□□□□□ -0.12
SP6Q3SY56 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.32□□□□□ -0.12
SP6Q3SY56 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.32□□□□□ -0.12
SP6Q3SY56 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SP6Q3SY56 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 AL596257.1-201ENST00000641463 2694 ntBASIC14.31□□□□□ -0.12
SP6Q3SY56 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 ECEL1P2-202ENST00000465689 757 ntBASIC14.31□□□□□ -0.12
SP6Q3SY56 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.31□□□□□ -0.12
SP6Q3SY56 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.31□□□□□ -0.12
SP6Q3SY56 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.31□□□□□ -0.12
SP6Q3SY56 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 PKD1P5-201ENST00000532415 10291 ntBASIC14.31□□□□□ -0.12
SP6Q3SY56 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.31□□□□□ -0.12
SP6Q3SY56 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP6Q3SY56 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.31□□□□□ -0.12
SP6Q3SY56 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms