Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RPL39P62891 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.22□□□□□ -0.45
RPL39P62891 AL390955.1-201ENST00000428694 934 ntBASIC12.22□□□□□ -0.45
RPL39P62891 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.22□□□□□ -0.45
RPL39P62891 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.22□□□□□ -0.45
RPL39P62891 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.22□□□□□ -0.45
RPL39P62891 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 AP003071.4-201ENST00000562276 1284 ntBASIC12.22□□□□□ -0.45
RPL39P62891 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RPL39P62891 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.22□□□□□ -0.45
RPL39P62891 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.22□□□□□ -0.45
RPL39P62891 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPL39P62891 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RPL39P62891 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RPL39P62891 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.21□□□□□ -0.45
RPL39P62891 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.21□□□□□ -0.45
RPL39P62891 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RPL39P62891 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
RPL39P62891 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.21□□□□□ -0.45
RPL39P62891 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.21□□□□□ -0.45
RPL39P62891 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RPL39P62891 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.21□□□□□ -0.45
RPL39P62891 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RPL39P62891 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RPL39P62891 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
RPL39P62891 RBM17P1-201ENST00000453646 1190 ntBASIC12.21□□□□□ -0.45
RPL39P62891 AC112698.1-201ENST00000510299 916 ntBASIC12.21□□□□□ -0.45
RPL39P62891 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.21□□□□□ -0.45
RPL39P62891 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.21□□□□□ -0.45
RPL39P62891 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.21□□□□□ -0.45
RPL39P62891 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.21□□□□□ -0.45
RPL39P62891 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RPL39P62891 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPL39P62891 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RPL39P62891 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RPL39P62891 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPL39P62891 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPL39P62891 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RPL39P62891 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.21□□□□□ -0.46
RPL39P62891 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
RPL39P62891 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
RPL39P62891 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RPL39P62891 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPL39P62891 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
RPL39P62891 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
RPL39P62891 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPL39P62891 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
RPL39P62891 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.21□□□□□ -0.46
RPL39P62891 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
RPL39P62891 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.2□□□□□ -0.46
RPL39P62891 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RPL39P62891 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms