Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D3P61077 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UBE2D3P61077 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D3P61077 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.31□□□□□ -0.44
UBE2D3P61077 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2D3P61077 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D3P61077 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D3P61077 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2D3P61077 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D3P61077 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D3P61077 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D3P61077 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D3P61077 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D3P61077 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2D3P61077 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
UBE2D3P61077 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UBE2D3P61077 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UBE2D3P61077 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UBE2D3P61077 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2D3P61077 AC211429.1-201ENST00000415277 523 ntBASIC12.3□□□□□ -0.44
UBE2D3P61077 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.3□□□□□ -0.44
UBE2D3P61077 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.3□□□□□ -0.44
UBE2D3P61077 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.3□□□□□ -0.44
UBE2D3P61077 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2D3P61077 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.3□□□□□ -0.44
UBE2D3P61077 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.3□□□□□ -0.44
UBE2D3P61077 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.3□□□□□ -0.44
UBE2D3P61077 AC083849.1-201ENST00000615227 514 ntBASIC12.3□□□□□ -0.44
UBE2D3P61077 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.3□□□□□ -0.44
UBE2D3P61077 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 HYMAI-201ENST00000635591 3347 ntBASIC12.3□□□□□ -0.44
UBE2D3P61077 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D3P61077 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2D3P61077 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D3P61077 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2D3P61077 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D3P61077 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D3P61077 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D3P61077 SPDYE13P-201ENST00000445314 798 ntBASIC12.29□□□□□ -0.44
UBE2D3P61077 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2D3P61077 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 AC063952.2-201ENST00000498792 1227 ntBASIC12.29□□□□□ -0.44
UBE2D3P61077 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.29□□□□□ -0.44
UBE2D3P61077 IGHV3-52-201ENST00000519770 353 ntBASIC12.29□□□□□ -0.44
UBE2D3P61077 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms