Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CMC4P56277 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.82□□□□□ -0.36
CMC4P56277 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.82□□□□□ -0.36
CMC4P56277 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.82□□□□□ -0.36
CMC4P56277 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.82□□□□□ -0.36
CMC4P56277 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.82□□□□□ -0.36
CMC4P56277 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.82□□□□□ -0.36
CMC4P56277 AL356488.2-201ENST00000602755 427 ntBASIC12.82□□□□□ -0.36
CMC4P56277 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 FAM215A-202ENST00000632077 792 ntBASIC12.82□□□□□ -0.36
CMC4P56277 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 AC093525.9-201ENST00000624961 1746 ntBASIC12.82□□□□□ -0.36
CMC4P56277 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.82□□□□□ -0.36
CMC4P56277 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 AL021920.2-201ENST00000624828 1351 ntBASIC12.81□□□□□ -0.36
CMC4P56277 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.81□□□□□ -0.36
CMC4P56277 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.81□□□□□ -0.36
CMC4P56277 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CMC4P56277 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CMC4P56277 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.81□□□□□ -0.36
CMC4P56277 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.81□□□□□ -0.36
CMC4P56277 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.81□□□□□ -0.36
CMC4P56277 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.81□□□□□ -0.36
CMC4P56277 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.81□□□□□ -0.36
CMC4P56277 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 AL590787.1-201ENST00000568856 1315 ntBASIC12.81□□□□□ -0.36
CMC4P56277 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.81□□□□□ -0.36
CMC4P56277 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.81□□□□□ -0.36
CMC4P56277 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.81□□□□□ -0.36
CMC4P56277 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMC4P56277 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CMC4P56277 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.8□□□□□ -0.36
CMC4P56277 AC004817.3-201ENST00000602957 2129 ntBASIC12.8□□□□□ -0.36
CMC4P56277 AC116353.5-201ENST00000638148 1699 ntBASIC12.8□□□□□ -0.36
CMC4P56277 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMC4P56277 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMC4P56277 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CMC4P56277 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMC4P56277 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CMC4P56277 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.8□□□□□ -0.36
CMC4P56277 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms