Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
KNTC1P50748 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.29■□□□□ 0.2
KNTC1P50748 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KNTC1P50748 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.29■□□□□ 0.2
KNTC1P50748 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.29■□□□□ 0.2
KNTC1P50748 MIR943-201ENST00000401286 94 ntBASIC16.29■□□□□ 0.2
KNTC1P50748 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KNTC1P50748 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KNTC1P50748 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.28■□□□□ 0.2
KNTC1P50748 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
KNTC1P50748 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KNTC1P50748 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 KRT8P23-201ENST00000560090 1207 ntBASIC16.28■□□□□ 0.2
KNTC1P50748 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.28■□□□□ 0.2
KNTC1P50748 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.28■□□□□ 0.2
KNTC1P50748 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 AC104581.1-202ENST00000635932 2618 ntBASIC16.28■□□□□ 0.2
KNTC1P50748 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KNTC1P50748 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KNTC1P50748 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.27■□□□□ 0.2
KNTC1P50748 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.27■□□□□ 0.2
KNTC1P50748 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KNTC1P50748 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
KNTC1P50748 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KNTC1P50748 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KNTC1P50748 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.27■□□□□ 0.2
KNTC1P50748 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
KNTC1P50748 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
KNTC1P50748 SPDYE22P-201ENST00000582158 798 ntBASIC16.27■□□□□ 0.2
KNTC1P50748 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KNTC1P50748 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.27■□□□□ 0.2
KNTC1P50748 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.27■□□□□ 0.2
KNTC1P50748 GNAS-203ENST00000306120 1878 ntBASIC16.27■□□□□ 0.2
KNTC1P50748 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KNTC1P50748 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.27■□□□□ 0.2
KNTC1P50748 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.27■□□□□ 0.2
KNTC1P50748 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.27■□□□□ 0.2
KNTC1P50748 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.27■□□□□ 0.2
KNTC1P50748 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KNTC1P50748 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.27■□□□□ 0.2
KNTC1P50748 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KNTC1P50748 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
KNTC1P50748 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KNTC1P50748 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.27■□□□□ 0.19
KNTC1P50748 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.27■□□□□ 0.19
KNTC1P50748 RBPMS2P1-201ENST00000437762 623 ntBASIC16.27■□□□□ 0.19
KNTC1P50748 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.27■□□□□ 0.19
KNTC1P50748 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.27■□□□□ 0.19
KNTC1P50748 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.27■□□□□ 0.19
KNTC1P50748 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.27■□□□□ 0.19
KNTC1P50748 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KNTC1P50748 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.27■□□□□ 0.19
KNTC1P50748 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KNTC1P50748 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KNTC1P50748 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.27■□□□□ 0.19
KNTC1P50748 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KNTC1P50748 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KNTC1P50748 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.27■□□□□ 0.19
KNTC1P50748 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
KNTC1P50748 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.26■□□□□ 0.19
KNTC1P50748 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 NME2P1-201ENST00000426182 414 ntBASIC16.26■□□□□ 0.19
KNTC1P50748 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.26■□□□□ 0.19
KNTC1P50748 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.26■□□□□ 0.19
KNTC1P50748 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.26■□□□□ 0.19
KNTC1P50748 AC026120.1-201ENST00000611536 926 ntBASIC16.26■□□□□ 0.19
KNTC1P50748 AL662799.1-202ENST00000614205 422 ntBASIC16.26■□□□□ 0.19
KNTC1P50748 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.26■□□□□ 0.19
KNTC1P50748 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.26■□□□□ 0.19
KNTC1P50748 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
KNTC1P50748 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KNTC1P50748 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
KNTC1P50748 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms