Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC1A6P48664 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC1A6P48664 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A6P48664 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A6P48664 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC1A6P48664 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.96■□□□□ 0.31
SLC1A6P48664 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 MIR662-201ENST00000384847 95 ntBASIC16.96■□□□□ 0.31
SLC1A6P48664 STARP1-201ENST00000397973 869 ntBASIC16.96■□□□□ 0.31
SLC1A6P48664 AC007967.3-201ENST00000434308 558 ntBASIC16.96■□□□□ 0.31
SLC1A6P48664 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A6P48664 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC1A6P48664 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SLC1A6P48664 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A6P48664 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A6P48664 AL513523.2-202ENST00000427283 2040 ntBASIC16.96■□□□□ 0.3
SLC1A6P48664 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC1A6P48664 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A6P48664 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A6P48664 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC1A6P48664 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC1A6P48664 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A6P48664 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC1A6P48664 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC1A6P48664 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC1A6P48664 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A6P48664 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC1A6P48664 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC1A6P48664 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC1A6P48664 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SLC1A6P48664 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A6P48664 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC1A6P48664 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A6P48664 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC1A6P48664 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC1A6P48664 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A6P48664 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A6P48664 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC1A6P48664 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A6P48664 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC1A6P48664 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC1A6P48664 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A6P48664 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SLC1A6P48664 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.94■□□□□ 0.3
SLC1A6P48664 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.94■□□□□ 0.3
SLC1A6P48664 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 COX11P1-201ENST00000489116 835 ntBASIC16.94■□□□□ 0.3
SLC1A6P48664 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC1A6P48664 AC005332.3-201ENST00000589904 676 ntBASIC16.94■□□□□ 0.3
SLC1A6P48664 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SLC1A6P48664 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
SLC1A6P48664 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC1A6P48664 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms