Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.88■□□□□ 0.45
H2AFXP16104 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.88■□□□□ 0.45
H2AFXP16104 AC080038.1-201ENST00000611274 1154 ntBASIC17.88■□□□□ 0.45
H2AFXP16104 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.88■□□□□ 0.45
H2AFXP16104 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.88■□□□□ 0.45
H2AFXP16104 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
H2AFXP16104 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
H2AFXP16104 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2AFXP16104 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
H2AFXP16104 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
H2AFXP16104 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2AFXP16104 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.88■□□□□ 0.45
H2AFXP16104 FSCN1P1-201ENST00000568912 1481 ntBASIC17.88■□□□□ 0.45
H2AFXP16104 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2AFXP16104 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
H2AFXP16104 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.87■□□□□ 0.45
H2AFXP16104 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.87■□□□□ 0.45
H2AFXP16104 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 MFAP1P1-201ENST00000442257 1255 ntBASIC17.87■□□□□ 0.45
H2AFXP16104 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 AC233263.1-201ENST00000578059 224 ntBASIC17.87■□□□□ 0.45
H2AFXP16104 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 AC023908.3-201ENST00000564211 3047 ntBASIC17.87■□□□□ 0.45
H2AFXP16104 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2AFXP16104 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.87■□□□□ 0.45
H2AFXP16104 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
H2AFXP16104 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
H2AFXP16104 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.86■□□□□ 0.45
H2AFXP16104 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.86■□□□□ 0.45
H2AFXP16104 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
H2AFXP16104 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.86■□□□□ 0.45
H2AFXP16104 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.86■□□□□ 0.45
H2AFXP16104 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
H2AFXP16104 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.86■□□□□ 0.45
H2AFXP16104 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.86■□□□□ 0.45
H2AFXP16104 AC098934.4-201ENST00000564127 592 ntBASIC17.86■□□□□ 0.45
H2AFXP16104 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
H2AFXP16104 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.86■□□□□ 0.45
H2AFXP16104 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
H2AFXP16104 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.86■□□□□ 0.45
H2AFXP16104 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.86■□□□□ 0.45
H2AFXP16104 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.86■□□□□ 0.45
H2AFXP16104 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
H2AFXP16104 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.86■□□□□ 0.45
H2AFXP16104 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.86■□□□□ 0.45
H2AFXP16104 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2AFXP16104 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.85■□□□□ 0.45
H2AFXP16104 CROCCP1-201ENST00000426910 5675 ntBASIC17.85■□□□□ 0.45
H2AFXP16104 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
H2AFXP16104 OR6D1P-203ENST00000641209 4860 ntBASIC17.85■□□□□ 0.45
H2AFXP16104 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2AFXP16104 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
H2AFXP16104 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2AFXP16104 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2AFXP16104 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.85■□□□□ 0.45
H2AFXP16104 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.85■□□□□ 0.45
H2AFXP16104 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
H2AFXP16104 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.85■□□□□ 0.45
H2AFXP16104 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
H2AFXP16104 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms