Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
LINGO3P0C6S8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.71■□□□□ 0.27
LINGO3P0C6S8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 AC034232.1-201ENST00000506026 1064 ntBASIC16.71■□□□□ 0.27
LINGO3P0C6S8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 AL157888.1-201ENST00000631930 593 ntBASIC16.71■□□□□ 0.27
LINGO3P0C6S8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 AC133963.1-201ENST00000504166 1679 ntBASIC16.71■□□□□ 0.27
LINGO3P0C6S8 PHGDH-209ENST00000641074 1780 ntBASIC16.71■□□□□ 0.27
LINGO3P0C6S8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINGO3P0C6S8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LINGO3P0C6S8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LINGO3P0C6S8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LINGO3P0C6S8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
LINGO3P0C6S8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 STARP1-201ENST00000397973 869 ntBASIC16.7■□□□□ 0.26
LINGO3P0C6S8 RASA4DP-201ENST00000460726 1199 ntBASIC16.7■□□□□ 0.26
LINGO3P0C6S8 DUX4L26-201ENST00000489078 1255 ntBASIC16.7■□□□□ 0.26
LINGO3P0C6S8 AC063952.2-201ENST00000498792 1227 ntBASIC16.7■□□□□ 0.26
LINGO3P0C6S8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 AC005915.1-201ENST00000624912 2018 ntBASIC16.7■□□□□ 0.26
LINGO3P0C6S8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINGO3P0C6S8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINGO3P0C6S8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINGO3P0C6S8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINGO3P0C6S8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINGO3P0C6S8 AC104581.4-201ENST00000623126 3052 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms