Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-AP01891 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-AP01891 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-AP01891 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.6□□□□□ -0.07
HLA-AP01891 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-AP01891 AC112497.1-201ENST00000624824 639 ntBASIC14.6□□□□□ -0.07
HLA-AP01891 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-AP01891 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HLA-AP01891 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-AP01891 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-AP01891 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.6□□□□□ -0.07
HLA-AP01891 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
HLA-AP01891 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-AP01891 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-AP01891 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-AP01891 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HLA-AP01891 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-AP01891 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-AP01891 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-AP01891 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-AP01891 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.59□□□□□ -0.07
HLA-AP01891 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-AP01891 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-AP01891 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-AP01891 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-AP01891 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-AP01891 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-AP01891 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-AP01891 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
HLA-AP01891 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.58□□□□□ -0.07
HLA-AP01891 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-AP01891 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-AP01891 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-AP01891 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-AP01891 AC093525.9-201ENST00000624961 1746 ntBASIC14.58□□□□□ -0.07
HLA-AP01891 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-AP01891 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-AP01891 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-AP01891 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-AP01891 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-AP01891 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HLA-AP01891 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-AP01891 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-AP01891 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-AP01891 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-AP01891 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-AP01891 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-AP01891 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-AP01891 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms