Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 AC092171.3-201ENST00000610122 2651 ntBASIC13.67□□□□□ -0.22
IFNA1P01562 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
IFNA1P01562 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.67□□□□□ -0.22
IFNA1P01562 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
IFNA1P01562 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 KRT16P5-201ENST00000455284 522 ntBASIC13.67□□□□□ -0.22
IFNA1P01562 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 MIR3180-4-201ENST00000582223 153 ntBASIC13.67□□□□□ -0.22
IFNA1P01562 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 AC023824.1-201ENST00000562945 2975 ntBASIC13.67□□□□□ -0.22
IFNA1P01562 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.67□□□□□ -0.22
IFNA1P01562 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.66□□□□□ -0.22
IFNA1P01562 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
IFNA1P01562 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 NIFKP9-201ENST00000419265 221 ntBASIC13.66□□□□□ -0.22
IFNA1P01562 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.66□□□□□ -0.22
IFNA1P01562 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.66□□□□□ -0.22
IFNA1P01562 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.66□□□□□ -0.22
IFNA1P01562 AC124947.2-201ENST00000547118 1133 ntBASIC13.66□□□□□ -0.22
IFNA1P01562 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.66□□□□□ -0.22
IFNA1P01562 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.66□□□□□ -0.22
IFNA1P01562 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
IFNA1P01562 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 AC093525.9-201ENST00000624961 1746 ntBASIC13.66□□□□□ -0.22
IFNA1P01562 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.66□□□□□ -0.22
IFNA1P01562 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
IFNA1P01562 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IFNA1P01562 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
IFNA1P01562 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
IFNA1P01562 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IFNA1P01562 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IFNA1P01562 BX276092.7-203ENST00000637198 1536 ntBASIC13.65□□□□□ -0.22
IFNA1P01562 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IFNA1P01562 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IFNA1P01562 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IFNA1P01562 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms