Protein–RNA interactions for Protein: P00846

MT-ATP6, ATP synthase subunit a, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ATP6P00846 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 AC105020.1-201ENST00000435356 2205 ntBASIC15.48■□□□□ 0.07
MT-ATP6P00846 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ATP6P00846 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
MT-ATP6P00846 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 NKILA-202ENST00000614771 2598 ntBASIC15.47■□□□□ 0.07
MT-ATP6P00846 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 LINC00982-205ENST00000420957 435 ntBASIC15.47■□□□□ 0.07
MT-ATP6P00846 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 AL022326.1-202ENST00000641533 845 ntBASIC15.47■□□□□ 0.07
MT-ATP6P00846 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 AC004817.3-201ENST00000602957 2129 ntBASIC15.47■□□□□ 0.07
MT-ATP6P00846 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ATP6P00846 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-ATP6P00846 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 TUBB8P12-201ENST00000308911 1335 ntBASIC15.46■□□□□ 0.07
MT-ATP6P00846 TUBB7P-202ENST00000428444 1305 ntBASIC15.46■□□□□ 0.07
MT-ATP6P00846 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 TUBB8P7-204ENST00000567960 1332 ntBASIC15.46■□□□□ 0.07
MT-ATP6P00846 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 KRT18P31-201ENST00000506277 1292 ntBASIC15.46■□□□□ 0.07
MT-ATP6P00846 AP002490.2-201ENST00000524791 560 ntBASIC15.46■□□□□ 0.07
MT-ATP6P00846 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ATP6P00846 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
MT-ATP6P00846 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MT-ATP6P00846 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms