Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC11.62□□□□□ -0.55
SNCGO76070 KRT18P55-202ENST00000578578 1546 ntBASIC11.62□□□□□ -0.55
SNCGO76070 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.62□□□□□ -0.55
SNCGO76070 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 AP000593.1-201ENST00000393668 712 ntBASIC11.62□□□□□ -0.55
SNCGO76070 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 AC073210.2-201ENST00000430369 194 ntBASIC11.62□□□□□ -0.55
SNCGO76070 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 RHOF-204ENST00000537265 699 ntTSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 BRI3-207ENST00000539286 699 ntTSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC11.62□□□□□ -0.55
SNCGO76070 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.62□□□□□ -0.55
SNCGO76070 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
SNCGO76070 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC11.62□□□□□ -0.55
SNCGO76070 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SNCGO76070 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 AC126177.1-201ENST00000547829 2218 ntBASIC11.62□□□□□ -0.55
SNCGO76070 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SNCGO76070 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.61□□□□□ -0.55
SNCGO76070 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 CYP2T1P-202ENST00000641596 2535 ntBASIC11.61□□□□□ -0.55
SNCGO76070 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SNCGO76070 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
SNCGO76070 KRT18P16-201ENST00000510337 1294 ntBASIC11.61□□□□□ -0.55
SNCGO76070 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 SP2-202ENST00000613139 908 ntTSL 5 BASIC11.61□□□□□ -0.55
SNCGO76070 AL136967.2-201ENST00000623968 743 ntBASIC11.61□□□□□ -0.55
SNCGO76070 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.61□□□□□ -0.55
SNCGO76070 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SNCGO76070 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SNCGO76070 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
SNCGO76070 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 AC006449.5-201ENST00000610658 2098 ntBASIC11.61□□□□□ -0.55
SNCGO76070 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
SNCGO76070 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SNCGO76070 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
SNCGO76070 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SNCGO76070 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SNCGO76070 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC11.6□□□□□ -0.55
SNCGO76070 AC004854.2-201ENST00000608450 1441 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms