Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LGR5O75473 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.03■□□□□ 0.64
LGR5O75473 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.03■□□□□ 0.64
LGR5O75473 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.03■□□□□ 0.64
LGR5O75473 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.02■□□□□ 0.64
LGR5O75473 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LGR5O75473 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LGR5O75473 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
LGR5O75473 NOC2LP2-201ENST00000407594 1944 ntBASIC19.02■□□□□ 0.64
LGR5O75473 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.02■□□□□ 0.64
LGR5O75473 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.02■□□□□ 0.64
LGR5O75473 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LGR5O75473 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.02■□□□□ 0.64
LGR5O75473 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.02■□□□□ 0.64
LGR5O75473 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.02■□□□□ 0.64
LGR5O75473 AC106028.4-201ENST00000614509 607 ntBASIC19.02■□□□□ 0.64
LGR5O75473 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 AC092919.2-201ENST00000623631 1645 ntBASIC19.02■□□□□ 0.64
LGR5O75473 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.02■□□□□ 0.64
LGR5O75473 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LGR5O75473 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
LGR5O75473 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.02■□□□□ 0.63
LGR5O75473 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
LGR5O75473 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LGR5O75473 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.02■□□□□ 0.63
LGR5O75473 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 AC116353.5-201ENST00000638148 1699 ntBASIC19.01■□□□□ 0.63
LGR5O75473 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.01■□□□□ 0.63
LGR5O75473 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.01■□□□□ 0.63
LGR5O75473 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.01■□□□□ 0.63
LGR5O75473 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 AP000344.2-201ENST00000512987 629 ntBASIC19.01■□□□□ 0.63
LGR5O75473 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.01■□□□□ 0.63
LGR5O75473 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 AL645728.2-201ENST00000641974 660 ntBASIC19.01■□□□□ 0.63
LGR5O75473 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
LGR5O75473 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
LGR5O75473 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LGR5O75473 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
LGR5O75473 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19■□□□□ 0.63
LGR5O75473 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LGR5O75473 AC093525.9-201ENST00000624961 1746 ntBASIC19■□□□□ 0.63
LGR5O75473 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19■□□□□ 0.63
LGR5O75473 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
LGR5O75473 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19■□□□□ 0.63
LGR5O75473 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19■□□□□ 0.63
LGR5O75473 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LGR5O75473 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LGR5O75473 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LGR5O75473 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19■□□□□ 0.63
LGR5O75473 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19■□□□□ 0.63
LGR5O75473 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
LGR5O75473 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LGR5O75473 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19■□□□□ 0.63
LGR5O75473 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19■□□□□ 0.63
LGR5O75473 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19■□□□□ 0.63
LGR5O75473 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LGR5O75473 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LGR5O75473 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LGR5O75473 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
LGR5O75473 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LGR5O75473 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
LGR5O75473 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LGR5O75473 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LGR5O75473 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms