Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 BX005266.1-201ENST00000473402 457 ntBASIC18.43■□□□□ 0.54
FOXN3O00409 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.43■□□□□ 0.54
FOXN3O00409 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXN3O00409 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.43■□□□□ 0.54
FOXN3O00409 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXN3O00409 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXN3O00409 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
FOXN3O00409 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FOXN3O00409 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXN3O00409 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXN3O00409 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXN3O00409 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FOXN3O00409 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN3O00409 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN3O00409 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXN3O00409 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN3O00409 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN3O00409 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FOXN3O00409 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FOXN3O00409 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN3O00409 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXN3O00409 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXN3O00409 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXN3O00409 AL121772.3-201ENST00000610840 674 ntBASIC18.42■□□□□ 0.54
FOXN3O00409 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXN3O00409 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN3O00409 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXN3O00409 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN3O00409 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN3O00409 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN3O00409 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
FOXN3O00409 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN3O00409 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
FOXN3O00409 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXN3O00409 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN3O00409 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN3O00409 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXN3O00409 MTDHP3-201ENST00000594186 672 ntBASIC18.41■□□□□ 0.54
FOXN3O00409 AC064862.7-201ENST00000604520 867 ntBASIC18.41■□□□□ 0.54
FOXN3O00409 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXN3O00409 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXN3O00409 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN3O00409 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FOXN3O00409 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN3O00409 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FOXN3O00409 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN3O00409 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
FOXN3O00409 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN3O00409 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN3O00409 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN3O00409 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
FOXN3O00409 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
FOXN3O00409 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN3O00409 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
FOXN3O00409 RBM17P3-201ENST00000417687 1192 ntBASIC18.4■□□□□ 0.54
FOXN3O00409 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXN3O00409 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN3O00409 AC091304.2-201ENST00000564639 760 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms