Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AC093525.9-201ENST00000624961 1746 ntBASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 AC002558.1-201ENST00000488906 803 ntBASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 UNC93B7-201ENST00000509439 705 ntBASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF25A6NGN4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 AC132008.2-207ENST00000454517 770 ntBASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 AC019129.2-201ENST00000609837 1235 ntBASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF25A6NGN4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PRAMEF25A6NGN4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PRAMEF25A6NGN4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PRAMEF25A6NGN4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.14■□□□□ 0.18
PRAMEF25A6NGN4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF25A6NGN4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms