Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.02■□□□□ -0
SHISA3A0PJX4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SHISA3A0PJX4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.02■□□□□ -0
SHISA3A0PJX4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SHISA3A0PJX4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.02■□□□□ -0
SHISA3A0PJX4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.02■□□□□ -0
SHISA3A0PJX4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.02■□□□□ -0
SHISA3A0PJX4 GCSHP2-201ENST00000560971 527 ntBASIC15.02■□□□□ -0
SHISA3A0PJX4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.02■□□□□ -0
SHISA3A0PJX4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SHISA3A0PJX4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.01□□□□□ -0.01
SHISA3A0PJX4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 MYCLP1-201ENST00000372451 1075 ntBASIC15.01□□□□□ -0.01
SHISA3A0PJX4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 UBE2SP1-201ENST00000450587 669 ntBASIC15.01□□□□□ -0.01
SHISA3A0PJX4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 AL136038.4-201ENST00000603606 1261 ntBASIC15.01□□□□□ -0.01
SHISA3A0PJX4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 ME2P1-201ENST00000426028 1970 ntBASIC15.01□□□□□ -0.01
SHISA3A0PJX4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms