Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 EGLN1P1-201ENST00000531623 762 ntBASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 AL512604.3-201ENST00000569583 964 ntBASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TCRBV3S1A0A5B6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 GPR89P-201ENST00000407924 1495 ntBASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 AL391807.1-203ENST00000604392 2365 ntBASIC16.12■□□□□ 0.17
TCRBV3S1A0A5B6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 AC023824.1-201ENST00000562945 2975 ntBASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms