Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC211429.1-201ENST00000415277 523 ntBASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 LINC01023-201ENST00000606054 436 ntBASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 LINC02199-201ENST00000506655 2702 ntBASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC079328.2-201ENST00000561241 3354 ntBASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF103-CHMP3A0A140T963 BX276092.7-203ENST00000637198 1536 ntBASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 AL391005.1-201ENST00000623953 2435 ntBASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF103-CHMP3A0A140T963 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RNF103-CHMP3A0A140T963 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 LINC01311-201ENST00000565162 1445 ntBASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 MTCL1P1-201ENST00000446207 792 ntBASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC005332.3-201ENST00000589904 676 ntBASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms