Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHGA11Q9Y5H2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.34
PCDHGA11Q9Y5H2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHGA11Q9Y5H2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA11Q9Y5H2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA11Q9Y5H2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDHGA11Q9Y5H2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA11Q9Y5H2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA11Q9Y5H2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA11Q9Y5H2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA11Q9Y5H2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA11Q9Y5H2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PCDHGA11Q9Y5H2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA11Q9Y5H2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA11Q9Y5H2 MIR4449-201ENST00000578365 66 ntBASIC23.37■■□□□ 1.33
PCDHGA11Q9Y5H2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PCDHGA11Q9Y5H2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 AL157400.5-201ENST00000507624 621 ntBASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 AC010501.1-201ENST00000606270 1962 ntBASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA11Q9Y5H2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA11Q9Y5H2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA11Q9Y5H2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA11Q9Y5H2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGA11Q9Y5H2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA11Q9Y5H2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA11Q9Y5H2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA11Q9Y5H2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGA11Q9Y5H2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA11Q9Y5H2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA11Q9Y5H2 ERN1-208ENST00000606895 2068 ntBASIC23.34■■□□□ 1.33
PCDHGA11Q9Y5H2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA11Q9Y5H2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 AC022413.1-201ENST00000624602 984 ntBASIC23.33■■□□□ 1.33
PCDHGA11Q9Y5H2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGA11Q9Y5H2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.33■■□□□ 1.32
PCDHGA11Q9Y5H2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGA11Q9Y5H2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA11Q9Y5H2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA11Q9Y5H2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGA11Q9Y5H2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.32■■□□□ 1.32
PCDHGA11Q9Y5H2 AC092296.2-201ENST00000589470 999 ntBASIC23.32■■□□□ 1.32
PCDHGA11Q9Y5H2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA11Q9Y5H2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA11Q9Y5H2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHGA11Q9Y5H2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA11Q9Y5H2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.31■■□□□ 1.32
PCDHGA11Q9Y5H2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA11Q9Y5H2 AC025884.2-201ENST00000553429 711 ntBASIC23.31■■□□□ 1.32
PCDHGA11Q9Y5H2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHGA11Q9Y5H2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHGA11Q9Y5H2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA11Q9Y5H2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA11Q9Y5H2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHGA11Q9Y5H2 SMPD5-203ENST00000639008 1464 ntBASIC23.29■■□□□ 1.32
PCDHGA11Q9Y5H2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA11Q9Y5H2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA11Q9Y5H2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 ECEL1P2-201ENST00000461596 1295 ntBASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA11Q9Y5H2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA11Q9Y5H2 MIR3960-201ENST00000583311 91 ntBASIC23.27■■□□□ 1.32
PCDHGA11Q9Y5H2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDHGA11Q9Y5H2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA11Q9Y5H2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGA11Q9Y5H2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDHGA11Q9Y5H2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHGA11Q9Y5H2 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms