Protein–RNA interactions for Protein: Q9UBR1

UPB1, Beta-ureidopropionase, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPB1Q9UBR1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.64■■□□□ 1.05
UPB1Q9UBR1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.64■■□□□ 1.05
UPB1Q9UBR1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPB1Q9UBR1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.63■■□□□ 1.05
UPB1Q9UBR1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
UPB1Q9UBR1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.63■■□□□ 1.05
UPB1Q9UBR1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPB1Q9UBR1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
UPB1Q9UBR1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.62■■□□□ 1.05
UPB1Q9UBR1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPB1Q9UBR1 RP9P-202ENST00000450133 1212 ntBASIC21.62■■□□□ 1.05
UPB1Q9UBR1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.61■■□□□ 1.05
UPB1Q9UBR1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPB1Q9UBR1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.61■■□□□ 1.05
UPB1Q9UBR1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPB1Q9UBR1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPB1Q9UBR1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPB1Q9UBR1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UPB1Q9UBR1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.6■■□□□ 1.05
UPB1Q9UBR1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.6■■□□□ 1.05
UPB1Q9UBR1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UPB1Q9UBR1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UPB1Q9UBR1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPB1Q9UBR1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPB1Q9UBR1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
UPB1Q9UBR1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPB1Q9UBR1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UPB1Q9UBR1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.58■■□□□ 1.05
UPB1Q9UBR1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UPB1Q9UBR1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
UPB1Q9UBR1 AC093536.1-201ENST00000569153 554 ntBASIC21.58■■□□□ 1.05
UPB1Q9UBR1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
UPB1Q9UBR1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UPB1Q9UBR1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UPB1Q9UBR1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.57■■□□□ 1.04
UPB1Q9UBR1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPB1Q9UBR1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPB1Q9UBR1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
UPB1Q9UBR1 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.56■■□□□ 1.04
UPB1Q9UBR1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPB1Q9UBR1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPB1Q9UBR1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPB1Q9UBR1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.56■■□□□ 1.04
UPB1Q9UBR1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPB1Q9UBR1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPB1Q9UBR1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPB1Q9UBR1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.55■■□□□ 1.04
UPB1Q9UBR1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPB1Q9UBR1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPB1Q9UBR1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 AC133552.2-201ENST00000619106 1032 ntBASIC21.54■■□□□ 1.04
UPB1Q9UBR1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPB1Q9UBR1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPB1Q9UBR1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.53■■□□□ 1.04
UPB1Q9UBR1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPB1Q9UBR1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
UPB1Q9UBR1 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.53■■□□□ 1.04
UPB1Q9UBR1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.53■■□□□ 1.04
UPB1Q9UBR1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UPB1Q9UBR1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UPB1Q9UBR1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
UPB1Q9UBR1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UPB1Q9UBR1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UPB1Q9UBR1 NTF6A-201ENST00000591175 560 ntBASIC21.52■■□□□ 1.04
UPB1Q9UBR1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 AC026202.3-201ENST00000600805 1127 ntBASIC21.51■■□□□ 1.03
UPB1Q9UBR1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPB1Q9UBR1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPB1Q9UBR1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPB1Q9UBR1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPB1Q9UBR1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.5■■□□□ 1.03
UPB1Q9UBR1 U85056.1-201ENST00000616429 682 ntBASIC21.5■■□□□ 1.03
UPB1Q9UBR1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UPB1Q9UBR1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPB1Q9UBR1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms