Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC35.39■■■■□ 3.26
SLC52A1Q9NWF4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
SLC52A1Q9NWF4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC35.39■■■■□ 3.26
SLC52A1Q9NWF4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC35.39■■■■□ 3.26
SLC52A1Q9NWF4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC35.38■■■■□ 3.25
SLC52A1Q9NWF4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC35.38■■■■□ 3.25
SLC52A1Q9NWF4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC35.38■■■■□ 3.25
SLC52A1Q9NWF4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
SLC52A1Q9NWF4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
SLC52A1Q9NWF4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
SLC52A1Q9NWF4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC35.36■■■■□ 3.25
SLC52A1Q9NWF4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC35.36■■■■□ 3.25
SLC52A1Q9NWF4 GRAMD4P7-201ENST00000578182 1232 ntBASIC35.36■■■■□ 3.25
SLC52A1Q9NWF4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC35.36■■■■□ 3.25
SLC52A1Q9NWF4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
SLC52A1Q9NWF4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
SLC52A1Q9NWF4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
SLC52A1Q9NWF4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
SLC52A1Q9NWF4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC35.34■■■■□ 3.25
SLC52A1Q9NWF4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
SLC52A1Q9NWF4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC35.33■■■■□ 3.25
SLC52A1Q9NWF4 KRT125P-201ENST00000546827 989 ntBASIC35.33■■■■□ 3.25
SLC52A1Q9NWF4 MIR4787-201ENST00000607364 84 ntBASIC35.33■■■■□ 3.25
SLC52A1Q9NWF4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC35.33■■■■□ 3.25
SLC52A1Q9NWF4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.25
SLC52A1Q9NWF4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC35.32■■■■□ 3.24
SLC52A1Q9NWF4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
SLC52A1Q9NWF4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC35.32■■■■□ 3.24
SLC52A1Q9NWF4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC35.32■■■■□ 3.24
SLC52A1Q9NWF4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC35.32■■■■□ 3.24
SLC52A1Q9NWF4 AC008406.3-201ENST00000620001 1374 ntBASIC35.31■■■■□ 3.24
SLC52A1Q9NWF4 KRT18P24-201ENST00000344739 1156 ntBASIC35.31■■■■□ 3.24
SLC52A1Q9NWF4 BX664725.1-201ENST00000438252 379 ntBASIC35.31■■■■□ 3.24
SLC52A1Q9NWF4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
SLC52A1Q9NWF4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC35.29■■■■□ 3.24
SLC52A1Q9NWF4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
SLC52A1Q9NWF4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC35.29■■■■□ 3.24
SLC52A1Q9NWF4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC35.29■■■■□ 3.24
SLC52A1Q9NWF4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
SLC52A1Q9NWF4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
SLC52A1Q9NWF4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC35.28■■■■□ 3.24
SLC52A1Q9NWF4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
SLC52A1Q9NWF4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
SLC52A1Q9NWF4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC35.28■■■■□ 3.24
SLC52A1Q9NWF4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC35.28■■■■□ 3.24
SLC52A1Q9NWF4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
SLC52A1Q9NWF4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC35.28■■■■□ 3.24
SLC52A1Q9NWF4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC35.28■■■■□ 3.24
SLC52A1Q9NWF4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC35.26■■■■□ 3.24
SLC52A1Q9NWF4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
SLC52A1Q9NWF4 UNC93B8-201ENST00000511903 705 ntBASIC35.26■■■■□ 3.24
SLC52A1Q9NWF4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC35.26■■■■□ 3.24
SLC52A1Q9NWF4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC35.26■■■■□ 3.23
SLC52A1Q9NWF4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.23
SLC52A1Q9NWF4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC35.25■■■■□ 3.23
SLC52A1Q9NWF4 ABCB10P1-201ENST00000614297 2181 ntBASIC35.24■■■■□ 3.23
SLC52A1Q9NWF4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
SLC52A1Q9NWF4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC35.24■■■■□ 3.23
SLC52A1Q9NWF4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC35.24■■■■□ 3.23
SLC52A1Q9NWF4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC35.23■■■■□ 3.23
SLC52A1Q9NWF4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
SLC52A1Q9NWF4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
SLC52A1Q9NWF4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC35.23■■■■□ 3.23
SLC52A1Q9NWF4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC35.23■■■■□ 3.23
SLC52A1Q9NWF4 AC137630.3-201ENST00000607245 391 ntBASIC35.23■■■■□ 3.23
SLC52A1Q9NWF4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
SLC52A1Q9NWF4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
SLC52A1Q9NWF4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
SLC52A1Q9NWF4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC35.22■■■■□ 3.23
SLC52A1Q9NWF4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
SLC52A1Q9NWF4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC35.22■■■■□ 3.23
SLC52A1Q9NWF4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC35.21■■■■□ 3.23
SLC52A1Q9NWF4 AL449106.1-201ENST00000608517 1980 ntBASIC35.21■■■■□ 3.23
SLC52A1Q9NWF4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
SLC52A1Q9NWF4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
SLC52A1Q9NWF4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
SLC52A1Q9NWF4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC35.19■■■■□ 3.22
SLC52A1Q9NWF4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
SLC52A1Q9NWF4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
SLC52A1Q9NWF4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
SLC52A1Q9NWF4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC35.18■■■■□ 3.22
SLC52A1Q9NWF4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC35.18■■■■□ 3.22
SLC52A1Q9NWF4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC35.16■■■■□ 3.22
SLC52A1Q9NWF4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC35.16■■■■□ 3.22
SLC52A1Q9NWF4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC35.16■■■■□ 3.22
SLC52A1Q9NWF4 AC021242.3-201ENST00000607598 1377 ntBASIC35.15■■■■□ 3.22
SLC52A1Q9NWF4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
SLC52A1Q9NWF4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC35.15■■■■□ 3.22
SLC52A1Q9NWF4 KRT16P3-201ENST00000439127 1283 ntBASIC35.15■■■■□ 3.22
SLC52A1Q9NWF4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
SLC52A1Q9NWF4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
SLC52A1Q9NWF4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC35.14■■■■□ 3.22
SLC52A1Q9NWF4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC35.14■■■■□ 3.22
SLC52A1Q9NWF4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC35.13■■■■□ 3.21
SLC52A1Q9NWF4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
SLC52A1Q9NWF4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC35.12■■■■□ 3.21
SLC52A1Q9NWF4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC35.12■■■■□ 3.21
SLC52A1Q9NWF4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
SLC52A1Q9NWF4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SLC52A1Q9NWF4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms