Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
KCNMB3Q9NPA1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
KCNMB3Q9NPA1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
KCNMB3Q9NPA1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.39■■□□□ 1.98
KCNMB3Q9NPA1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
KCNMB3Q9NPA1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
KCNMB3Q9NPA1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.39■■□□□ 1.98
KCNMB3Q9NPA1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
KCNMB3Q9NPA1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KCNMB3Q9NPA1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KCNMB3Q9NPA1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
KCNMB3Q9NPA1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KCNMB3Q9NPA1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
KCNMB3Q9NPA1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.37■■□□□ 1.97
KCNMB3Q9NPA1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
KCNMB3Q9NPA1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KCNMB3Q9NPA1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
KCNMB3Q9NPA1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KCNMB3Q9NPA1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KCNMB3Q9NPA1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
KCNMB3Q9NPA1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.35■■□□□ 1.97
KCNMB3Q9NPA1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
KCNMB3Q9NPA1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.35■■□□□ 1.97
KCNMB3Q9NPA1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KCNMB3Q9NPA1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.34■■□□□ 1.97
KCNMB3Q9NPA1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KCNMB3Q9NPA1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KCNMB3Q9NPA1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.33■■□□□ 1.97
KCNMB3Q9NPA1 SPCS2P3-201ENST00000500401 656 ntBASIC27.33■■□□□ 1.97
KCNMB3Q9NPA1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
KCNMB3Q9NPA1 AC129492.7-201ENST00000622992 756 ntBASIC27.33■■□□□ 1.97
KCNMB3Q9NPA1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.33■■□□□ 1.96
KCNMB3Q9NPA1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNMB3Q9NPA1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.32■■□□□ 1.96
KCNMB3Q9NPA1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
KCNMB3Q9NPA1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNMB3Q9NPA1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNMB3Q9NPA1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.32■■□□□ 1.96
KCNMB3Q9NPA1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KCNMB3Q9NPA1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
KCNMB3Q9NPA1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KCNMB3Q9NPA1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
KCNMB3Q9NPA1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
KCNMB3Q9NPA1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.31■■□□□ 1.96
KCNMB3Q9NPA1 AC092803.2-201ENST00000564287 1899 ntBASIC27.3■■□□□ 1.96
KCNMB3Q9NPA1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KCNMB3Q9NPA1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.3■■□□□ 1.96
KCNMB3Q9NPA1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
KCNMB3Q9NPA1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
KCNMB3Q9NPA1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
KCNMB3Q9NPA1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNMB3Q9NPA1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 ERN1-208ENST00000606895 2068 ntBASIC27.28■■□□□ 1.96
KCNMB3Q9NPA1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
KCNMB3Q9NPA1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.27■■□□□ 1.96
KCNMB3Q9NPA1 DUX4L9-201ENST00000449051 1259 ntBASIC27.27■■□□□ 1.96
KCNMB3Q9NPA1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
KCNMB3Q9NPA1 AC091060.1-201ENST00000623524 1766 ntBASIC27.27■■□□□ 1.96
KCNMB3Q9NPA1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KCNMB3Q9NPA1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.26■■□□□ 1.95
KCNMB3Q9NPA1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
KCNMB3Q9NPA1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
KCNMB3Q9NPA1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
KCNMB3Q9NPA1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.26■■□□□ 1.95
KCNMB3Q9NPA1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
KCNMB3Q9NPA1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.26■■□□□ 1.95
KCNMB3Q9NPA1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.25■■□□□ 1.95
KCNMB3Q9NPA1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.25■■□□□ 1.95
KCNMB3Q9NPA1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KCNMB3Q9NPA1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KCNMB3Q9NPA1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
KCNMB3Q9NPA1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
KCNMB3Q9NPA1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
KCNMB3Q9NPA1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
KCNMB3Q9NPA1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.24■■□□□ 1.95
KCNMB3Q9NPA1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.24■■□□□ 1.95
KCNMB3Q9NPA1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
KCNMB3Q9NPA1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KCNMB3Q9NPA1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
KCNMB3Q9NPA1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
KCNMB3Q9NPA1 AC004987.1-201ENST00000428627 508 ntBASIC27.22■■□□□ 1.95
KCNMB3Q9NPA1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.22■■□□□ 1.95
KCNMB3Q9NPA1 AC010501.1-201ENST00000606270 1962 ntBASIC27.21■■□□□ 1.95
KCNMB3Q9NPA1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
KCNMB3Q9NPA1 ATP5G2P3-201ENST00000429083 425 ntBASIC27.21■■□□□ 1.95
KCNMB3Q9NPA1 AC012354.3-201ENST00000623734 483 ntBASIC27.21■■□□□ 1.95
KCNMB3Q9NPA1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
KCNMB3Q9NPA1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
KCNMB3Q9NPA1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.21■■□□□ 1.95
KCNMB3Q9NPA1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
KCNMB3Q9NPA1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms