Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
SPC25Q9HBM1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPC25Q9HBM1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
SPC25Q9HBM1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.25■■□□□ 1.95
SPC25Q9HBM1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
SPC25Q9HBM1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPC25Q9HBM1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPC25Q9HBM1 BX664725.1-201ENST00000438252 379 ntBASIC27.24■■□□□ 1.95
SPC25Q9HBM1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SPC25Q9HBM1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SPC25Q9HBM1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
SPC25Q9HBM1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SPC25Q9HBM1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
SPC25Q9HBM1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SPC25Q9HBM1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SPC25Q9HBM1 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.22■■□□□ 1.95
SPC25Q9HBM1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.22■■□□□ 1.95
SPC25Q9HBM1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
SPC25Q9HBM1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SPC25Q9HBM1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.21■■□□□ 1.95
SPC25Q9HBM1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SPC25Q9HBM1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
SPC25Q9HBM1 AC008406.3-201ENST00000620001 1374 ntBASIC27.21■■□□□ 1.95
SPC25Q9HBM1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
SPC25Q9HBM1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPC25Q9HBM1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPC25Q9HBM1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SPC25Q9HBM1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
SPC25Q9HBM1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.2■■□□□ 1.94
SPC25Q9HBM1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.2■■□□□ 1.94
SPC25Q9HBM1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.19■■□□□ 1.94
SPC25Q9HBM1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SPC25Q9HBM1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.19■■□□□ 1.94
SPC25Q9HBM1 MIR4787-201ENST00000607364 84 ntBASIC27.19■■□□□ 1.94
SPC25Q9HBM1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SPC25Q9HBM1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SPC25Q9HBM1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SPC25Q9HBM1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SPC25Q9HBM1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SPC25Q9HBM1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SPC25Q9HBM1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPC25Q9HBM1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPC25Q9HBM1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPC25Q9HBM1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SPC25Q9HBM1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.17■■□□□ 1.94
SPC25Q9HBM1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPC25Q9HBM1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.15■■□□□ 1.94
SPC25Q9HBM1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.15■■□□□ 1.94
SPC25Q9HBM1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPC25Q9HBM1 AL449106.1-201ENST00000608517 1980 ntBASIC27.15■■□□□ 1.94
SPC25Q9HBM1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SPC25Q9HBM1 KRT18P24-201ENST00000344739 1156 ntBASIC27.14■■□□□ 1.94
SPC25Q9HBM1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SPC25Q9HBM1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.13■■□□□ 1.93
SPC25Q9HBM1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.13■■□□□ 1.93
SPC25Q9HBM1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
SPC25Q9HBM1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SPC25Q9HBM1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.12■■□□□ 1.93
SPC25Q9HBM1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SPC25Q9HBM1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SPC25Q9HBM1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
SPC25Q9HBM1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SPC25Q9HBM1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SPC25Q9HBM1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.11■■□□□ 1.93
SPC25Q9HBM1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SPC25Q9HBM1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SPC25Q9HBM1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SPC25Q9HBM1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SPC25Q9HBM1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPC25Q9HBM1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPC25Q9HBM1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SPC25Q9HBM1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPC25Q9HBM1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPC25Q9HBM1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPC25Q9HBM1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.09■■□□□ 1.93
SPC25Q9HBM1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.09■■□□□ 1.93
SPC25Q9HBM1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.09■■□□□ 1.93
SPC25Q9HBM1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.09■■□□□ 1.93
SPC25Q9HBM1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
SPC25Q9HBM1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.09■■□□□ 1.93
SPC25Q9HBM1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPC25Q9HBM1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
SPC25Q9HBM1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.08■■□□□ 1.93
SPC25Q9HBM1 KRT16P3-201ENST00000439127 1283 ntBASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms