Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRTM1Q9HBL6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRTM1Q9HBL6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LRTM1Q9HBL6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRTM1Q9HBL6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRTM1Q9HBL6 AC096887.2-201ENST00000623443 1957 ntBASIC23.21■■□□□ 1.31
LRTM1Q9HBL6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
LRTM1Q9HBL6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
LRTM1Q9HBL6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.21■■□□□ 1.31
LRTM1Q9HBL6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LRTM1Q9HBL6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
LRTM1Q9HBL6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LRTM1Q9HBL6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.2■■□□□ 1.3
LRTM1Q9HBL6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LRTM1Q9HBL6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LRTM1Q9HBL6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRTM1Q9HBL6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRTM1Q9HBL6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
LRTM1Q9HBL6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRTM1Q9HBL6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
LRTM1Q9HBL6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRTM1Q9HBL6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRTM1Q9HBL6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRTM1Q9HBL6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRTM1Q9HBL6 MIR7108-201ENST00000614319 87 ntBASIC23.16■■□□□ 1.3
LRTM1Q9HBL6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LRTM1Q9HBL6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRTM1Q9HBL6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRTM1Q9HBL6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRTM1Q9HBL6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.15■■□□□ 1.3
LRTM1Q9HBL6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRTM1Q9HBL6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRTM1Q9HBL6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRTM1Q9HBL6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRTM1Q9HBL6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
LRTM1Q9HBL6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.15■■□□□ 1.3
LRTM1Q9HBL6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
LRTM1Q9HBL6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRTM1Q9HBL6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LRTM1Q9HBL6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRTM1Q9HBL6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
LRTM1Q9HBL6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRTM1Q9HBL6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRTM1Q9HBL6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
LRTM1Q9HBL6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRTM1Q9HBL6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.13■■□□□ 1.29
LRTM1Q9HBL6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.13■■□□□ 1.29
LRTM1Q9HBL6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRTM1Q9HBL6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRTM1Q9HBL6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRTM1Q9HBL6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LRTM1Q9HBL6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.12■■□□□ 1.29
LRTM1Q9HBL6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LRTM1Q9HBL6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRTM1Q9HBL6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRTM1Q9HBL6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRTM1Q9HBL6 AC142381.3-201ENST00000568208 1670 ntBASIC23.11■■□□□ 1.29
LRTM1Q9HBL6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRTM1Q9HBL6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.11■■□□□ 1.29
LRTM1Q9HBL6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRTM1Q9HBL6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRTM1Q9HBL6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRTM1Q9HBL6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.1■■□□□ 1.29
LRTM1Q9HBL6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.1■■□□□ 1.29
LRTM1Q9HBL6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.1■■□□□ 1.29
LRTM1Q9HBL6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRTM1Q9HBL6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.1■■□□□ 1.29
LRTM1Q9HBL6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRTM1Q9HBL6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRTM1Q9HBL6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRTM1Q9HBL6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LRTM1Q9HBL6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LRTM1Q9HBL6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms