Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.44■■□□□ 1.18
SLC38A1Q9H2H9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SLC38A1Q9H2H9 AC096887.2-201ENST00000623443 1957 ntBASIC22.43■■□□□ 1.18
SLC38A1Q9H2H9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SLC38A1Q9H2H9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SLC38A1Q9H2H9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SLC38A1Q9H2H9 AC060814.1-201ENST00000554326 538 ntBASIC22.42■■□□□ 1.18
SLC38A1Q9H2H9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC38A1Q9H2H9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC38A1Q9H2H9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC38A1Q9H2H9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.41■■□□□ 1.18
SLC38A1Q9H2H9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SLC38A1Q9H2H9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC38A1Q9H2H9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SLC38A1Q9H2H9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC38A1Q9H2H9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SLC38A1Q9H2H9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC38A1Q9H2H9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC38A1Q9H2H9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.4■■□□□ 1.18
SLC38A1Q9H2H9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC38A1Q9H2H9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SLC38A1Q9H2H9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.39■■□□□ 1.17
SLC38A1Q9H2H9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC38A1Q9H2H9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.39■■□□□ 1.17
SLC38A1Q9H2H9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.39■■□□□ 1.17
SLC38A1Q9H2H9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC38A1Q9H2H9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.38■■□□□ 1.17
SLC38A1Q9H2H9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
SLC38A1Q9H2H9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.37■■□□□ 1.17
SLC38A1Q9H2H9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.37■■□□□ 1.17
SLC38A1Q9H2H9 AC135731.1-201ENST00000569415 2548 ntBASIC22.37■■□□□ 1.17
SLC38A1Q9H2H9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC38A1Q9H2H9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 AC025884.2-201ENST00000553429 711 ntBASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SLC38A1Q9H2H9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC38A1Q9H2H9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC38A1Q9H2H9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC38A1Q9H2H9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.35■■□□□ 1.17
SLC38A1Q9H2H9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC38A1Q9H2H9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SLC38A1Q9H2H9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC38A1Q9H2H9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SLC38A1Q9H2H9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.34■■□□□ 1.17
SLC38A1Q9H2H9 AC092296.2-201ENST00000589470 999 ntBASIC22.34■■□□□ 1.17
SLC38A1Q9H2H9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.34■■□□□ 1.17
SLC38A1Q9H2H9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
SLC38A1Q9H2H9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SLC38A1Q9H2H9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC38A1Q9H2H9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC38A1Q9H2H9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC38A1Q9H2H9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.33■■□□□ 1.17
SLC38A1Q9H2H9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC38A1Q9H2H9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SLC38A1Q9H2H9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC38A1Q9H2H9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC38A1Q9H2H9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC38A1Q9H2H9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC38A1Q9H2H9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC38A1Q9H2H9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC38A1Q9H2H9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC38A1Q9H2H9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.31■■□□□ 1.16
SLC38A1Q9H2H9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SLC38A1Q9H2H9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC38A1Q9H2H9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.3■■□□□ 1.16
SLC38A1Q9H2H9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLC38A1Q9H2H9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC38A1Q9H2H9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLC38A1Q9H2H9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SLC38A1Q9H2H9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.29■■□□□ 1.16
SLC38A1Q9H2H9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC38A1Q9H2H9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.29■■□□□ 1.16
SLC38A1Q9H2H9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC38A1Q9H2H9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms