Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A7Q99884 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A7Q99884 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A7Q99884 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A7Q99884 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SLC6A7Q99884 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SLC6A7Q99884 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A7Q99884 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A7Q99884 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A7Q99884 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SLC6A7Q99884 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A7Q99884 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A7Q99884 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A7Q99884 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A7Q99884 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A7Q99884 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SLC6A7Q99884 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A7Q99884 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A7Q99884 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A7Q99884 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A7Q99884 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A7Q99884 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC6A7Q99884 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A7Q99884 WHAMMP2-203ENST00000563942 1603 ntBASIC20.85■□□□□ 0.93
SLC6A7Q99884 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A7Q99884 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A7Q99884 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A7Q99884 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A7Q99884 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC6A7Q99884 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC6A7Q99884 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A7Q99884 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC6A7Q99884 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC6A7Q99884 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
SLC6A7Q99884 AC022413.1-201ENST00000624602 984 ntBASIC20.84■□□□□ 0.93
SLC6A7Q99884 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A7Q99884 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A7Q99884 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A7Q99884 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC6A7Q99884 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A7Q99884 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC6A7Q99884 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A7Q99884 AC008813.1-201ENST00000536597 885 ntBASIC20.82■□□□□ 0.92
SLC6A7Q99884 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A7Q99884 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A7Q99884 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A7Q99884 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SLC6A7Q99884 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A7Q99884 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A7Q99884 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A7Q99884 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.8■□□□□ 0.92
SLC6A7Q99884 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A7Q99884 ERN1-208ENST00000606895 2068 ntBASIC20.8■□□□□ 0.92
SLC6A7Q99884 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC6A7Q99884 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A7Q99884 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A7Q99884 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC6A7Q99884 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A7Q99884 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A7Q99884 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A7Q99884 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC6A7Q99884 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC6A7Q99884 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC6A7Q99884 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A7Q99884 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC6A7Q99884 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A7Q99884 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A7Q99884 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC6A7Q99884 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC6A7Q99884 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC6A7Q99884 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A7Q99884 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC6A7Q99884 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A7Q99884 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A7Q99884 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC6A7Q99884 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A7Q99884 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A7Q99884 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A7Q99884 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A7Q99884 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLC6A7Q99884 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A7Q99884 AC110285.7-201ENST00000624417 1536 ntBASIC20.73■□□□□ 0.91
SLC6A7Q99884 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.73■□□□□ 0.91
SLC6A7Q99884 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A7Q99884 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC6A7Q99884 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SLC6A7Q99884 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A7Q99884 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC6A7Q99884 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A7Q99884 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A7Q99884 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC6A7Q99884 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A7Q99884 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC6A7Q99884 NTF6A-201ENST00000591175 560 ntBASIC20.72■□□□□ 0.91
SLC6A7Q99884 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC6A7Q99884 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A7Q99884 AC142472.1-201ENST00000612013 1741 ntBASIC20.72■□□□□ 0.91
SLC6A7Q99884 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A7Q99884 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC6A7Q99884 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms