Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNS1Q96KK3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.25■□□□□ 0.51
KCNS1Q96KK3 AC142381.3-201ENST00000568208 1670 ntBASIC18.25■□□□□ 0.51
KCNS1Q96KK3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
KCNS1Q96KK3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNS1Q96KK3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNS1Q96KK3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNS1Q96KK3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KCNS1Q96KK3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
KCNS1Q96KK3 AC087741.3-201ENST00000624270 1347 ntBASIC18.23■□□□□ 0.51
KCNS1Q96KK3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KCNS1Q96KK3 AC110285.7-201ENST00000624417 1536 ntBASIC18.23■□□□□ 0.51
KCNS1Q96KK3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KCNS1Q96KK3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.22■□□□□ 0.51
KCNS1Q96KK3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.22■□□□□ 0.51
KCNS1Q96KK3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.22■□□□□ 0.51
KCNS1Q96KK3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNS1Q96KK3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KCNS1Q96KK3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNS1Q96KK3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KCNS1Q96KK3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KCNS1Q96KK3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KCNS1Q96KK3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KCNS1Q96KK3 AL139125.2-201ENST00000623134 1869 ntBASIC18.21■□□□□ 0.51
KCNS1Q96KK3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KCNS1Q96KK3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KCNS1Q96KK3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KCNS1Q96KK3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
KCNS1Q96KK3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.2■□□□□ 0.5
KCNS1Q96KK3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KCNS1Q96KK3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KCNS1Q96KK3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KCNS1Q96KK3 AP004609.3-201ENST00000610705 1884 ntBASIC18.2■□□□□ 0.5
KCNS1Q96KK3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KCNS1Q96KK3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KCNS1Q96KK3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.19■□□□□ 0.5
KCNS1Q96KK3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KCNS1Q96KK3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.19■□□□□ 0.5
KCNS1Q96KK3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KCNS1Q96KK3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KCNS1Q96KK3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNS1Q96KK3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
KCNS1Q96KK3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNS1Q96KK3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNS1Q96KK3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNS1Q96KK3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.16■□□□□ 0.5
KCNS1Q96KK3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNS1Q96KK3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNS1Q96KK3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNS1Q96KK3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNS1Q96KK3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNS1Q96KK3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.15■□□□□ 0.5
KCNS1Q96KK3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNS1Q96KK3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
KCNS1Q96KK3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
KCNS1Q96KK3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.14■□□□□ 0.5
KCNS1Q96KK3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KCNS1Q96KK3 AL162393.1-201ENST00000437852 946 ntBASIC18.14■□□□□ 0.49
KCNS1Q96KK3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.14■□□□□ 0.49
KCNS1Q96KK3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.14■□□□□ 0.49
KCNS1Q96KK3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 WHAMMP3-201ENST00000611636 1609 ntBASIC18.13■□□□□ 0.49
KCNS1Q96KK3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 AC142472.1-201ENST00000612013 1741 ntBASIC18.13■□□□□ 0.49
KCNS1Q96KK3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.13■□□□□ 0.49
KCNS1Q96KK3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KCNS1Q96KK3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNS1Q96KK3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KCNS1Q96KK3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms