Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD3Q96EY7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PTCD3Q96EY7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD3Q96EY7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD3Q96EY7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTCD3Q96EY7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.94■■□□□ 1.42
PTCD3Q96EY7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 AC142381.3-201ENST00000568208 1670 ntBASIC23.93■■□□□ 1.42
PTCD3Q96EY7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.93■■□□□ 1.42
PTCD3Q96EY7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PTCD3Q96EY7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD3Q96EY7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD3Q96EY7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.92■■□□□ 1.42
PTCD3Q96EY7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD3Q96EY7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.91■■□□□ 1.42
PTCD3Q96EY7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD3Q96EY7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD3Q96EY7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD3Q96EY7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD3Q96EY7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD3Q96EY7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.9■■□□□ 1.42
PTCD3Q96EY7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD3Q96EY7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD3Q96EY7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
PTCD3Q96EY7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
PTCD3Q96EY7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD3Q96EY7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD3Q96EY7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
PTCD3Q96EY7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.89■■□□□ 1.41
PTCD3Q96EY7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD3Q96EY7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.89■■□□□ 1.41
PTCD3Q96EY7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD3Q96EY7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD3Q96EY7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD3Q96EY7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.88■■□□□ 1.41
PTCD3Q96EY7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD3Q96EY7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD3Q96EY7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PTCD3Q96EY7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
PTCD3Q96EY7 AL139125.2-201ENST00000623134 1869 ntBASIC23.87■■□□□ 1.41
PTCD3Q96EY7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD3Q96EY7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.87■■□□□ 1.41
PTCD3Q96EY7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD3Q96EY7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD3Q96EY7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.87■■□□□ 1.41
PTCD3Q96EY7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.87■■□□□ 1.41
PTCD3Q96EY7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.87■■□□□ 1.41
PTCD3Q96EY7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD3Q96EY7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.86■■□□□ 1.41
PTCD3Q96EY7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD3Q96EY7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PTCD3Q96EY7 AC142472.1-201ENST00000612013 1741 ntBASIC23.84■■□□□ 1.41
PTCD3Q96EY7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD3Q96EY7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD3Q96EY7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PTCD3Q96EY7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD3Q96EY7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD3Q96EY7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PTCD3Q96EY7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD3Q96EY7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD3Q96EY7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.41
PTCD3Q96EY7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.83■■□□□ 1.41
PTCD3Q96EY7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PTCD3Q96EY7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD3Q96EY7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD3Q96EY7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.83■■□□□ 1.41
PTCD3Q96EY7 AC133561.1-201ENST00000568600 2415 ntBASIC23.83■■□□□ 1.41
PTCD3Q96EY7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PTCD3Q96EY7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD3Q96EY7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD3Q96EY7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD3Q96EY7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD3Q96EY7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD3Q96EY7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 306.7 ms