Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC10.24□□□□□ -0.77
SYNE2Q8WXH0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SYNE2Q8WXH0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC10.24□□□□□ -0.77
SYNE2Q8WXH0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SYNE2Q8WXH0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SYNE2Q8WXH0 AF213884.3-201ENST00000563833 479 ntBASIC10.24□□□□□ -0.77
SYNE2Q8WXH0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SYNE2Q8WXH0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC10.23□□□□□ -0.77
SYNE2Q8WXH0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SYNE2Q8WXH0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SYNE2Q8WXH0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SYNE2Q8WXH0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC10.23□□□□□ -0.77
SYNE2Q8WXH0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC10.23□□□□□ -0.77
SYNE2Q8WXH0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC10.23□□□□□ -0.77
SYNE2Q8WXH0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 AC091305.1-201ENST00000479476 895 ntBASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 AC034268.1-201ENST00000441047 882 ntBASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SYNE2Q8WXH0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC10.21□□□□□ -0.77
SYNE2Q8WXH0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
SYNE2Q8WXH0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC10.21□□□□□ -0.77
SYNE2Q8WXH0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SYNE2Q8WXH0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SYNE2Q8WXH0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
SYNE2Q8WXH0 AL136162.1-201ENST00000607711 1078 ntBASIC10.21□□□□□ -0.77
SYNE2Q8WXH0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 AL359258.2-201ENST00000564063 1566 ntBASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 AP001330.3-201ENST00000520123 633 ntBASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 AC093536.1-201ENST00000569153 554 ntBASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC10.21□□□□□ -0.78
SYNE2Q8WXH0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 AC004911.1-201ENST00000416316 871 ntBASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC10.2□□□□□ -0.78
SYNE2Q8WXH0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYNE2Q8WXH0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC10.19□□□□□ -0.78
SYNE2Q8WXH0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC10.19□□□□□ -0.78
SYNE2Q8WXH0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC10.19□□□□□ -0.78
SYNE2Q8WXH0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC10.19□□□□□ -0.78
SYNE2Q8WXH0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 AC087393.1-201ENST00000582896 145 ntBASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 GXYLT1P5-201ENST00000614548 1189 ntBASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 MIR6724-1-201ENST00000616420 92 ntBASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 MIR6724-2-201ENST00000616483 92 ntBASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 MIR6724-4-201ENST00000617390 92 ntBASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 MIR6724-3-201ENST00000622482 92 ntBASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 AC008687.6-201ENST00000596318 630 ntBASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 AC137630.3-201ENST00000607245 391 ntBASIC10.18□□□□□ -0.78
SYNE2Q8WXH0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SYNE2Q8WXH0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SYNE2Q8WXH0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC10.17□□□□□ -0.78
SYNE2Q8WXH0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYNE2Q8WXH0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYNE2Q8WXH0 TSPY20P-201ENST00000450910 630 ntBASIC10.17□□□□□ -0.78
SYNE2Q8WXH0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYNE2Q8WXH0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms