Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.68■□□□□ 0.9
SMIM4Q8WVI0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM4Q8WVI0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM4Q8WVI0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
SMIM4Q8WVI0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM4Q8WVI0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.68■□□□□ 0.9
SMIM4Q8WVI0 AC097639.1-201ENST00000565519 1891 ntBASIC20.67■□□□□ 0.9
SMIM4Q8WVI0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM4Q8WVI0 AC096887.2-201ENST00000623443 1957 ntBASIC20.67■□□□□ 0.9
SMIM4Q8WVI0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM4Q8WVI0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.67■□□□□ 0.9
SMIM4Q8WVI0 LINC00543-201ENST00000567234 1845 ntBASIC20.67■□□□□ 0.9
SMIM4Q8WVI0 AC079834.2-201ENST00000609776 1949 ntBASIC20.66■□□□□ 0.9
SMIM4Q8WVI0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SMIM4Q8WVI0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM4Q8WVI0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM4Q8WVI0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SMIM4Q8WVI0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM4Q8WVI0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM4Q8WVI0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM4Q8WVI0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM4Q8WVI0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM4Q8WVI0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.64■□□□□ 0.89
SMIM4Q8WVI0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM4Q8WVI0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM4Q8WVI0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SMIM4Q8WVI0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.63■□□□□ 0.89
SMIM4Q8WVI0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMIM4Q8WVI0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM4Q8WVI0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM4Q8WVI0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 AP003733.4-201ENST00000623785 1697 ntBASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 MIR762-201ENST00000390236 83 ntBASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM4Q8WVI0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMIM4Q8WVI0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM4Q8WVI0 AC108673.1-201ENST00000510422 1159 ntBASIC20.61■□□□□ 0.89
SMIM4Q8WVI0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM4Q8WVI0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM4Q8WVI0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM4Q8WVI0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM4Q8WVI0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM4Q8WVI0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SMIM4Q8WVI0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM4Q8WVI0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SMIM4Q8WVI0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.58■□□□□ 0.89
SMIM4Q8WVI0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM4Q8WVI0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SMIM4Q8WVI0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM4Q8WVI0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.58■□□□□ 0.88
SMIM4Q8WVI0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 AC110285.7-201ENST00000624417 1536 ntBASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.57■□□□□ 0.88
SMIM4Q8WVI0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.56■□□□□ 0.88
SMIM4Q8WVI0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.56■□□□□ 0.88
SMIM4Q8WVI0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SMIM4Q8WVI0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM4Q8WVI0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.56■□□□□ 0.88
SMIM4Q8WVI0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms