Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 WHAMMP3-201ENST00000611636 1609 ntBASIC20.67■□□□□ 0.9
CCDC107Q8WV48 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC107Q8WV48 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC107Q8WV48 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC107Q8WV48 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC107Q8WV48 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC107Q8WV48 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC107Q8WV48 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC107Q8WV48 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC107Q8WV48 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC107Q8WV48 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC107Q8WV48 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC107Q8WV48 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC107Q8WV48 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC107Q8WV48 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC107Q8WV48 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC107Q8WV48 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC107Q8WV48 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L13-201ENST00000554103 1267 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L15-201ENST00000611059 1267 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L23-201ENST00000615195 1269 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L24-201ENST00000617576 1269 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L22-201ENST00000618238 1269 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L20-201ENST00000619712 1269 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L21-201ENST00000622058 1269 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L10-201ENST00000622460 1267 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 DUX4L25-201ENST00000624915 1269 ntBASIC20.64■□□□□ 0.89
CCDC107Q8WV48 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC107Q8WV48 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 DUX4L11-201ENST00000611504 1267 ntBASIC20.63■□□□□ 0.89
CCDC107Q8WV48 DUX4L12-201ENST00000614593 1267 ntBASIC20.63■□□□□ 0.89
CCDC107Q8WV48 DUX4L14-201ENST00000621227 1267 ntBASIC20.63■□□□□ 0.89
CCDC107Q8WV48 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC107Q8WV48 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC107Q8WV48 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC107Q8WV48 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC107Q8WV48 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC107Q8WV48 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC107Q8WV48 ZNRF2P2-203ENST00000454624 420 ntBASIC20.62■□□□□ 0.89
CCDC107Q8WV48 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC107Q8WV48 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC107Q8WV48 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC107Q8WV48 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC107Q8WV48 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC107Q8WV48 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC107Q8WV48 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC107Q8WV48 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC107Q8WV48 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC107Q8WV48 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 AC012676.1-201ENST00000574705 1949 ntBASIC20.59■□□□□ 0.89
CCDC107Q8WV48 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.59■□□□□ 0.89
CCDC107Q8WV48 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC107Q8WV48 AC142472.1-201ENST00000612013 1741 ntBASIC20.58■□□□□ 0.89
CCDC107Q8WV48 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC107Q8WV48 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms