Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
SNIP1Q8TAD8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNIP1Q8TAD8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNIP1Q8TAD8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNIP1Q8TAD8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23■■□□□ 1.27
SNIP1Q8TAD8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23■■□□□ 1.27
SNIP1Q8TAD8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNIP1Q8TAD8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNIP1Q8TAD8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SNIP1Q8TAD8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNIP1Q8TAD8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.99■■□□□ 1.27
SNIP1Q8TAD8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNIP1Q8TAD8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNIP1Q8TAD8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNIP1Q8TAD8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNIP1Q8TAD8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.98■■□□□ 1.27
SNIP1Q8TAD8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNIP1Q8TAD8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.97■■□□□ 1.27
SNIP1Q8TAD8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNIP1Q8TAD8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.97■■□□□ 1.27
SNIP1Q8TAD8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 KRT18P24-201ENST00000344739 1156 ntBASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 AC131281.2-201ENST00000520478 145 ntBASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 AC137630.3-201ENST00000607245 391 ntBASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.96■■□□□ 1.27
SNIP1Q8TAD8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SNIP1Q8TAD8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.95■■□□□ 1.26
SNIP1Q8TAD8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
SNIP1Q8TAD8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.95■■□□□ 1.26
SNIP1Q8TAD8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.95■■□□□ 1.26
SNIP1Q8TAD8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.95■■□□□ 1.26
SNIP1Q8TAD8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SNIP1Q8TAD8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNIP1Q8TAD8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNIP1Q8TAD8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNIP1Q8TAD8 TSPY9P-201ENST00000440215 945 ntBASIC22.94■■□□□ 1.26
SNIP1Q8TAD8 TSPY11P-201ENST00000442607 1045 ntBASIC22.94■■□□□ 1.26
SNIP1Q8TAD8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.94■■□□□ 1.26
SNIP1Q8TAD8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.94■■□□□ 1.26
SNIP1Q8TAD8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNIP1Q8TAD8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.93■■□□□ 1.26
SNIP1Q8TAD8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SNIP1Q8TAD8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNIP1Q8TAD8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNIP1Q8TAD8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNIP1Q8TAD8 AC021242.3-201ENST00000607598 1377 ntBASIC22.92■■□□□ 1.26
SNIP1Q8TAD8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNIP1Q8TAD8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SNIP1Q8TAD8 KRT18P10-201ENST00000388836 1287 ntBASIC22.92■■□□□ 1.26
SNIP1Q8TAD8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.92■■□□□ 1.26
SNIP1Q8TAD8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.92■■□□□ 1.26
SNIP1Q8TAD8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
SNIP1Q8TAD8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNIP1Q8TAD8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNIP1Q8TAD8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SNIP1Q8TAD8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNIP1Q8TAD8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNIP1Q8TAD8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SNIP1Q8TAD8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
SNIP1Q8TAD8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.9■■□□□ 1.26
SNIP1Q8TAD8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.9■■□□□ 1.26
SNIP1Q8TAD8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.9■■□□□ 1.26
SNIP1Q8TAD8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.9■■□□□ 1.26
SNIP1Q8TAD8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNIP1Q8TAD8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNIP1Q8TAD8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNIP1Q8TAD8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SNIP1Q8TAD8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.89■■□□□ 1.26
SNIP1Q8TAD8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNIP1Q8TAD8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SNIP1Q8TAD8 AL136116.3-201ENST00000402907 1138 ntBASIC22.89■■□□□ 1.25
SNIP1Q8TAD8 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.89■■□□□ 1.25
SNIP1Q8TAD8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNIP1Q8TAD8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNIP1Q8TAD8 WHAMMP3-201ENST00000611636 1609 ntBASIC22.88■■□□□ 1.25
SNIP1Q8TAD8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNIP1Q8TAD8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
SNIP1Q8TAD8 ABCB10P3-201ENST00000561950 2166 ntBASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNIP1Q8TAD8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.86■■□□□ 1.25
SNIP1Q8TAD8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SNIP1Q8TAD8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SNIP1Q8TAD8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.86■■□□□ 1.25
SNIP1Q8TAD8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
SNIP1Q8TAD8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.86■■□□□ 1.25
SNIP1Q8TAD8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.86■■□□□ 1.25
SNIP1Q8TAD8 AC110285.6-201ENST00000617652 491 ntBASIC22.86■■□□□ 1.25
SNIP1Q8TAD8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms