Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.95■□□□□ 0.94
CSNK2A3Q8NEV1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK2A3Q8NEV1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK2A3Q8NEV1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK2A3Q8NEV1 DUSP8P4-201ENST00000399538 1761 ntBASIC20.95■□□□□ 0.94
CSNK2A3Q8NEV1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.94■□□□□ 0.94
CSNK2A3Q8NEV1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK2A3Q8NEV1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK2A3Q8NEV1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CSNK2A3Q8NEV1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK2A3Q8NEV1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK2A3Q8NEV1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK2A3Q8NEV1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK2A3Q8NEV1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK2A3Q8NEV1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.93■□□□□ 0.94
CSNK2A3Q8NEV1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CSNK2A3Q8NEV1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK2A3Q8NEV1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK2A3Q8NEV1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CSNK2A3Q8NEV1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK2A3Q8NEV1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK2A3Q8NEV1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK2A3Q8NEV1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK2A3Q8NEV1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CSNK2A3Q8NEV1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK2A3Q8NEV1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.91■□□□□ 0.94
CSNK2A3Q8NEV1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.91■□□□□ 0.94
CSNK2A3Q8NEV1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
CSNK2A3Q8NEV1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK2A3Q8NEV1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CSNK2A3Q8NEV1 AC060814.1-201ENST00000554326 538 ntBASIC20.9■□□□□ 0.94
CSNK2A3Q8NEV1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK2A3Q8NEV1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.89■□□□□ 0.94
CSNK2A3Q8NEV1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CSNK2A3Q8NEV1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSNK2A3Q8NEV1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CSNK2A3Q8NEV1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CSNK2A3Q8NEV1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK2A3Q8NEV1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK2A3Q8NEV1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK2A3Q8NEV1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CSNK2A3Q8NEV1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CSNK2A3Q8NEV1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK2A3Q8NEV1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.88■□□□□ 0.93
CSNK2A3Q8NEV1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.88■□□□□ 0.93
CSNK2A3Q8NEV1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK2A3Q8NEV1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK2A3Q8NEV1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK2A3Q8NEV1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CSNK2A3Q8NEV1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK2A3Q8NEV1 MIR4449-201ENST00000578365 66 ntBASIC20.87■□□□□ 0.93
CSNK2A3Q8NEV1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK2A3Q8NEV1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK2A3Q8NEV1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.86■□□□□ 0.93
CSNK2A3Q8NEV1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 AL157400.5-201ENST00000507624 621 ntBASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.85■□□□□ 0.93
CSNK2A3Q8NEV1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK2A3Q8NEV1 AC022413.1-201ENST00000624602 984 ntBASIC20.84■□□□□ 0.93
CSNK2A3Q8NEV1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK2A3Q8NEV1 AC010501.1-201ENST00000606270 1962 ntBASIC20.84■□□□□ 0.93
CSNK2A3Q8NEV1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CSNK2A3Q8NEV1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 AC092296.2-201ENST00000589470 999 ntBASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK2A3Q8NEV1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK2A3Q8NEV1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK2A3Q8NEV1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK2A3Q8NEV1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK2A3Q8NEV1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.82■□□□□ 0.92
CSNK2A3Q8NEV1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.82■□□□□ 0.92
CSNK2A3Q8NEV1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK2A3Q8NEV1 AC025884.2-201ENST00000553429 711 ntBASIC20.82■□□□□ 0.92
CSNK2A3Q8NEV1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK2A3Q8NEV1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 516.2 ms