Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
RTL9Q8NET4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RTL9Q8NET4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.18■■■□□ 2.42
RTL9Q8NET4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RTL9Q8NET4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.18■■■□□ 2.42
RTL9Q8NET4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RTL9Q8NET4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.18■■■□□ 2.42
RTL9Q8NET4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RTL9Q8NET4 RPS2P7-201ENST00000447334 885 ntBASIC30.17■■■□□ 2.42
RTL9Q8NET4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RTL9Q8NET4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RTL9Q8NET4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RTL9Q8NET4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RTL9Q8NET4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
RTL9Q8NET4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RTL9Q8NET4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RTL9Q8NET4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RTL9Q8NET4 AL592295.1-201ENST00000400984 884 ntBASIC30.15■■■□□ 2.42
RTL9Q8NET4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.15■■■□□ 2.42
RTL9Q8NET4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
RTL9Q8NET4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.15■■■□□ 2.42
RTL9Q8NET4 AC142086.6-201ENST00000621154 1765 ntBASIC30.15■■■□□ 2.42
RTL9Q8NET4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RTL9Q8NET4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
RTL9Q8NET4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.14■■■□□ 2.42
RTL9Q8NET4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
RTL9Q8NET4 YBX1P4-201ENST00000392794 808 ntBASIC30.14■■■□□ 2.41
RTL9Q8NET4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RTL9Q8NET4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RTL9Q8NET4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RTL9Q8NET4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTL9Q8NET4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTL9Q8NET4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RTL9Q8NET4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RTL9Q8NET4 LONRF2P2-201ENST00000439212 571 ntBASIC30.11■■■□□ 2.41
RTL9Q8NET4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RTL9Q8NET4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RTL9Q8NET4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
RTL9Q8NET4 AC103724.3-201ENST00000564481 992 ntBASIC30.1■■■□□ 2.41
RTL9Q8NET4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RTL9Q8NET4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RTL9Q8NET4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.08■■■□□ 2.41
RTL9Q8NET4 KRT18P10-201ENST00000388836 1287 ntBASIC30.07■■■□□ 2.4
RTL9Q8NET4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
RTL9Q8NET4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RTL9Q8NET4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.07■■■□□ 2.4
RTL9Q8NET4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.07■■■□□ 2.4
RTL9Q8NET4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.07■■■□□ 2.4
RTL9Q8NET4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
RTL9Q8NET4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
RTL9Q8NET4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
RTL9Q8NET4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.06■■■□□ 2.4
RTL9Q8NET4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RTL9Q8NET4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.05■■■□□ 2.4
RTL9Q8NET4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.05■■■□□ 2.4
RTL9Q8NET4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RTL9Q8NET4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RTL9Q8NET4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RTL9Q8NET4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
RTL9Q8NET4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RTL9Q8NET4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RTL9Q8NET4 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.04■■■□□ 2.4
RTL9Q8NET4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
RTL9Q8NET4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.04■■■□□ 2.4
RTL9Q8NET4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RTL9Q8NET4 GUSBP5-201ENST00000418136 578 ntBASIC30.03■■■□□ 2.4
RTL9Q8NET4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL9Q8NET4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL9Q8NET4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
RTL9Q8NET4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
RTL9Q8NET4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
RTL9Q8NET4 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.03■■■□□ 2.4
RTL9Q8NET4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.03■■■□□ 2.4
RTL9Q8NET4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTL9Q8NET4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.02■■■□□ 2.4
RTL9Q8NET4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTL9Q8NET4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.02■■■□□ 2.4
RTL9Q8NET4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTL9Q8NET4 AP004609.3-201ENST00000610705 1884 ntBASIC30.01■■■□□ 2.4
RTL9Q8NET4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
RTL9Q8NET4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.01■■■□□ 2.39
RTL9Q8NET4 AL031848.2-201ENST00000607670 837 ntBASIC30■■■□□ 2.39
RTL9Q8NET4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RTL9Q8NET4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.99■■■□□ 2.39
RTL9Q8NET4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RTL9Q8NET4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.99■■■□□ 2.39
RTL9Q8NET4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC29.99■■■□□ 2.39
RTL9Q8NET4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RTL9Q8NET4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RTL9Q8NET4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.98■■■□□ 2.39
RTL9Q8NET4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
RTL9Q8NET4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.98■■■□□ 2.39
RTL9Q8NET4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
RTL9Q8NET4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
RTL9Q8NET4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RTL9Q8NET4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTL9Q8NET4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC29.97■■■□□ 2.39
RTL9Q8NET4 AC131212.1-201ENST00000613771 668 ntBASIC29.97■■■□□ 2.39
RTL9Q8NET4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RTL9Q8NET4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms