Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMRP1Q8NCR6 KRT18P24-201ENST00000344739 1156 ntBASIC25.52■■□□□ 1.68
SMRP1Q8NCR6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMRP1Q8NCR6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMRP1Q8NCR6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.52■■□□□ 1.68
SMRP1Q8NCR6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SMRP1Q8NCR6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.52■■□□□ 1.68
SMRP1Q8NCR6 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.52■■□□□ 1.68
SMRP1Q8NCR6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMRP1Q8NCR6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.51■■□□□ 1.67
SMRP1Q8NCR6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMRP1Q8NCR6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.5■■□□□ 1.67
SMRP1Q8NCR6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SMRP1Q8NCR6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.5■■□□□ 1.67
SMRP1Q8NCR6 AC137630.3-201ENST00000607245 391 ntBASIC25.5■■□□□ 1.67
SMRP1Q8NCR6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.5■■□□□ 1.67
SMRP1Q8NCR6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMRP1Q8NCR6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMRP1Q8NCR6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMRP1Q8NCR6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMRP1Q8NCR6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMRP1Q8NCR6 TSPY9P-201ENST00000440215 945 ntBASIC25.49■■□□□ 1.67
SMRP1Q8NCR6 TSPY11P-201ENST00000442607 1045 ntBASIC25.49■■□□□ 1.67
SMRP1Q8NCR6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMRP1Q8NCR6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.48■■□□□ 1.67
SMRP1Q8NCR6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.48■■□□□ 1.67
SMRP1Q8NCR6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.48■■□□□ 1.67
SMRP1Q8NCR6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.48■■□□□ 1.67
SMRP1Q8NCR6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SMRP1Q8NCR6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
SMRP1Q8NCR6 AC021242.3-201ENST00000607598 1377 ntBASIC25.47■■□□□ 1.67
SMRP1Q8NCR6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SMRP1Q8NCR6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.47■■□□□ 1.67
SMRP1Q8NCR6 AC131281.2-201ENST00000520478 145 ntBASIC25.47■■□□□ 1.67
SMRP1Q8NCR6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.47■■□□□ 1.67
SMRP1Q8NCR6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMRP1Q8NCR6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMRP1Q8NCR6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.46■■□□□ 1.67
SMRP1Q8NCR6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMRP1Q8NCR6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SMRP1Q8NCR6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
SMRP1Q8NCR6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMRP1Q8NCR6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.45■■□□□ 1.66
SMRP1Q8NCR6 KRT18P10-201ENST00000388836 1287 ntBASIC25.45■■□□□ 1.66
SMRP1Q8NCR6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.45■■□□□ 1.66
SMRP1Q8NCR6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.45■■□□□ 1.66
SMRP1Q8NCR6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.44■■□□□ 1.66
SMRP1Q8NCR6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.44■■□□□ 1.66
SMRP1Q8NCR6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.44■■□□□ 1.66
SMRP1Q8NCR6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.44■■□□□ 1.66
SMRP1Q8NCR6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMRP1Q8NCR6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
SMRP1Q8NCR6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.43■■□□□ 1.66
SMRP1Q8NCR6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SMRP1Q8NCR6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMRP1Q8NCR6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.42■■□□□ 1.66
SMRP1Q8NCR6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SMRP1Q8NCR6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.42■■□□□ 1.66
SMRP1Q8NCR6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
SMRP1Q8NCR6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.41■■□□□ 1.66
SMRP1Q8NCR6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.41■■□□□ 1.66
SMRP1Q8NCR6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SMRP1Q8NCR6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SMRP1Q8NCR6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.4■■□□□ 1.66
SMRP1Q8NCR6 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.4■■□□□ 1.66
SMRP1Q8NCR6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMRP1Q8NCR6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.4■■□□□ 1.66
SMRP1Q8NCR6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SMRP1Q8NCR6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
SMRP1Q8NCR6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.39■■□□□ 1.65
SMRP1Q8NCR6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMRP1Q8NCR6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SMRP1Q8NCR6 AL136116.3-201ENST00000402907 1138 ntBASIC25.38■■□□□ 1.65
SMRP1Q8NCR6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.38■■□□□ 1.65
SMRP1Q8NCR6 AC092028.1-203ENST00000608262 953 ntBASIC25.38■■□□□ 1.65
SMRP1Q8NCR6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMRP1Q8NCR6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.37■■□□□ 1.65
SMRP1Q8NCR6 AC120024.1-201ENST00000562672 995 ntBASIC25.37■■□□□ 1.65
SMRP1Q8NCR6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMRP1Q8NCR6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.36■■□□□ 1.65
SMRP1Q8NCR6 AC110285.6-201ENST00000617652 491 ntBASIC25.36■■□□□ 1.65
SMRP1Q8NCR6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.36■■□□□ 1.65
SMRP1Q8NCR6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
SMRP1Q8NCR6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMRP1Q8NCR6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMRP1Q8NCR6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
SMRP1Q8NCR6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.35■■□□□ 1.65
SMRP1Q8NCR6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMRP1Q8NCR6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.35■■□□□ 1.65
SMRP1Q8NCR6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SMRP1Q8NCR6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SMRP1Q8NCR6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMRP1Q8NCR6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.34■■□□□ 1.65
SMRP1Q8NCR6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.34■■□□□ 1.65
SMRP1Q8NCR6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMRP1Q8NCR6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMRP1Q8NCR6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
SMRP1Q8NCR6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SMRP1Q8NCR6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.33■■□□□ 1.65
SMRP1Q8NCR6 AL117332.1-201ENST00000622628 974 ntBASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms