Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AC009299.2-201ENST00000482477 511 ntBASIC26.43■■□□□ 1.82
RNF169Q8NCN4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RNF169Q8NCN4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF169Q8NCN4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF169Q8NCN4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
RNF169Q8NCN4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.41■■□□□ 1.82
RNF169Q8NCN4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
RNF169Q8NCN4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
RNF169Q8NCN4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
RNF169Q8NCN4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RNF169Q8NCN4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNF169Q8NCN4 MIR4508-201ENST00000584178 70 ntBASIC26.39■■□□□ 1.82
RNF169Q8NCN4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RNF169Q8NCN4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF169Q8NCN4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF169Q8NCN4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF169Q8NCN4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RNF169Q8NCN4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF169Q8NCN4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF169Q8NCN4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RNF169Q8NCN4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.38■■□□□ 1.81
RNF169Q8NCN4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.38■■□□□ 1.81
RNF169Q8NCN4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 AC087393.1-201ENST00000582896 145 ntBASIC26.37■■□□□ 1.81
RNF169Q8NCN4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF169Q8NCN4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
RNF169Q8NCN4 RPS2P7-201ENST00000447334 885 ntBASIC26.36■■□□□ 1.81
RNF169Q8NCN4 AC103724.3-201ENST00000564481 992 ntBASIC26.36■■□□□ 1.81
RNF169Q8NCN4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RNF169Q8NCN4 BX255925.1-201ENST00000566954 1854 ntBASIC26.36■■□□□ 1.81
RNF169Q8NCN4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
RNF169Q8NCN4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RNF169Q8NCN4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF169Q8NCN4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF169Q8NCN4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
RNF169Q8NCN4 AL031848.2-201ENST00000607670 837 ntBASIC26.35■■□□□ 1.81
RNF169Q8NCN4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF169Q8NCN4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF169Q8NCN4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.34■■□□□ 1.81
RNF169Q8NCN4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.34■■□□□ 1.81
RNF169Q8NCN4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.33■■□□□ 1.81
RNF169Q8NCN4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF169Q8NCN4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.33■■□□□ 1.81
RNF169Q8NCN4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.33■■□□□ 1.81
RNF169Q8NCN4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RNF169Q8NCN4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF169Q8NCN4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RNF169Q8NCN4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RNF169Q8NCN4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF169Q8NCN4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF169Q8NCN4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF169Q8NCN4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
RNF169Q8NCN4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF169Q8NCN4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF169Q8NCN4 AC142086.6-201ENST00000621154 1765 ntBASIC26.3■■□□□ 1.8
RNF169Q8NCN4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RNF169Q8NCN4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF169Q8NCN4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RNF169Q8NCN4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF169Q8NCN4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.3■■□□□ 1.8
RNF169Q8NCN4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF169Q8NCN4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF169Q8NCN4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF169Q8NCN4 AC142472.1-201ENST00000612013 1741 ntBASIC26.28■■□□□ 1.8
RNF169Q8NCN4 AP004609.3-201ENST00000610705 1884 ntBASIC26.28■■□□□ 1.8
RNF169Q8NCN4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RNF169Q8NCN4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RNF169Q8NCN4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF169Q8NCN4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF169Q8NCN4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RNF169Q8NCN4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RNF169Q8NCN4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms