Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NANOGP1Q8N7R0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NANOGP1Q8N7R0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.55■■□□□ 1.04
NANOGP1Q8N7R0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NANOGP1Q8N7R0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NANOGP1Q8N7R0 AC012676.1-201ENST00000574705 1949 ntBASIC21.55■■□□□ 1.04
NANOGP1Q8N7R0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NANOGP1Q8N7R0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.54■■□□□ 1.04
NANOGP1Q8N7R0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.54■■□□□ 1.04
NANOGP1Q8N7R0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NANOGP1Q8N7R0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NANOGP1Q8N7R0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NANOGP1Q8N7R0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
NANOGP1Q8N7R0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 LINC01124-201ENST00000409786 2117 ntBASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 DUX4L28-201ENST00000623687 678 ntBASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.52■■□□□ 1.04
NANOGP1Q8N7R0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
NANOGP1Q8N7R0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NANOGP1Q8N7R0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.51■■□□□ 1.03
NANOGP1Q8N7R0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NANOGP1Q8N7R0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NANOGP1Q8N7R0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
NANOGP1Q8N7R0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NANOGP1Q8N7R0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NANOGP1Q8N7R0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NANOGP1Q8N7R0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NANOGP1Q8N7R0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NANOGP1Q8N7R0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.49■■□□□ 1.03
NANOGP1Q8N7R0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NANOGP1Q8N7R0 AP003733.4-201ENST00000623785 1697 ntBASIC21.49■■□□□ 1.03
NANOGP1Q8N7R0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NANOGP1Q8N7R0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NANOGP1Q8N7R0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NANOGP1Q8N7R0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
NANOGP1Q8N7R0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.47■■□□□ 1.03
NANOGP1Q8N7R0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NANOGP1Q8N7R0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NANOGP1Q8N7R0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NANOGP1Q8N7R0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NANOGP1Q8N7R0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NANOGP1Q8N7R0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
NANOGP1Q8N7R0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NANOGP1Q8N7R0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NANOGP1Q8N7R0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NANOGP1Q8N7R0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NANOGP1Q8N7R0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NANOGP1Q8N7R0 AC097639.1-201ENST00000565519 1891 ntBASIC21.43■■□□□ 1.02
NANOGP1Q8N7R0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NANOGP1Q8N7R0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.43■■□□□ 1.02
NANOGP1Q8N7R0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms