Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.12■■□□□ 1.61
RFX6Q8HWS3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFX6Q8HWS3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFX6Q8HWS3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RFX6Q8HWS3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.11■■□□□ 1.61
RFX6Q8HWS3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFX6Q8HWS3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFX6Q8HWS3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RFX6Q8HWS3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.1■■□□□ 1.61
RFX6Q8HWS3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RFX6Q8HWS3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.1■■□□□ 1.61
RFX6Q8HWS3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RFX6Q8HWS3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RFX6Q8HWS3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX6Q8HWS3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RFX6Q8HWS3 AC060814.1-201ENST00000554326 538 ntBASIC25.09■■□□□ 1.61
RFX6Q8HWS3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RFX6Q8HWS3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFX6Q8HWS3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFX6Q8HWS3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RFX6Q8HWS3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.09■■□□□ 1.61
RFX6Q8HWS3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RFX6Q8HWS3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RFX6Q8HWS3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.08■■□□□ 1.61
RFX6Q8HWS3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.08■■□□□ 1.61
RFX6Q8HWS3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RFX6Q8HWS3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RFX6Q8HWS3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RFX6Q8HWS3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
RFX6Q8HWS3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFX6Q8HWS3 AL157400.5-201ENST00000507624 621 ntBASIC25.07■■□□□ 1.6
RFX6Q8HWS3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFX6Q8HWS3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFX6Q8HWS3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RFX6Q8HWS3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFX6Q8HWS3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.06■■□□□ 1.6
RFX6Q8HWS3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFX6Q8HWS3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
RFX6Q8HWS3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFX6Q8HWS3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFX6Q8HWS3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFX6Q8HWS3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.05■■□□□ 1.6
RFX6Q8HWS3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.05■■□□□ 1.6
RFX6Q8HWS3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFX6Q8HWS3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFX6Q8HWS3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFX6Q8HWS3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
RFX6Q8HWS3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.03■■□□□ 1.6
RFX6Q8HWS3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.03■■□□□ 1.6
RFX6Q8HWS3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.03■■□□□ 1.6
RFX6Q8HWS3 AC096887.2-201ENST00000623443 1957 ntBASIC25.03■■□□□ 1.6
RFX6Q8HWS3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.03■■□□□ 1.6
RFX6Q8HWS3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RFX6Q8HWS3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
RFX6Q8HWS3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
RFX6Q8HWS3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFX6Q8HWS3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFX6Q8HWS3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RFX6Q8HWS3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFX6Q8HWS3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFX6Q8HWS3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.01■■□□□ 1.59
RFX6Q8HWS3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFX6Q8HWS3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFX6Q8HWS3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFX6Q8HWS3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25■■□□□ 1.59
RFX6Q8HWS3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25■■□□□ 1.59
RFX6Q8HWS3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFX6Q8HWS3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFX6Q8HWS3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25■■□□□ 1.59
RFX6Q8HWS3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25■■□□□ 1.59
RFX6Q8HWS3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFX6Q8HWS3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RFX6Q8HWS3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.99■■□□□ 1.59
RFX6Q8HWS3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFX6Q8HWS3 AC022413.1-201ENST00000624602 984 ntBASIC24.99■■□□□ 1.59
RFX6Q8HWS3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
RFX6Q8HWS3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.98■■□□□ 1.59
RFX6Q8HWS3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFX6Q8HWS3 AC025884.2-201ENST00000553429 711 ntBASIC24.98■■□□□ 1.59
RFX6Q8HWS3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.98■■□□□ 1.59
RFX6Q8HWS3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RFX6Q8HWS3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.97■■□□□ 1.59
RFX6Q8HWS3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFX6Q8HWS3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.97■■□□□ 1.59
RFX6Q8HWS3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.97■■□□□ 1.59
RFX6Q8HWS3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFX6Q8HWS3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.96■■□□□ 1.59
RFX6Q8HWS3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.96■■□□□ 1.59
RFX6Q8HWS3 AC092296.2-201ENST00000589470 999 ntBASIC24.96■■□□□ 1.59
RFX6Q8HWS3 AC135731.1-201ENST00000569415 2548 ntBASIC24.96■■□□□ 1.59
RFX6Q8HWS3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFX6Q8HWS3 SMPD5-203ENST00000639008 1464 ntBASIC24.96■■□□□ 1.59
RFX6Q8HWS3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RFX6Q8HWS3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
RFX6Q8HWS3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFX6Q8HWS3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RFX6Q8HWS3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RFX6Q8HWS3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RFX6Q8HWS3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.95■■□□□ 1.58
RFX6Q8HWS3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms