Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAI1Q7Z5J4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAI1Q7Z5J4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RAI1Q7Z5J4 YBX1P4-201ENST00000392794 808 ntBASIC20.89■□□□□ 0.93
RAI1Q7Z5J4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.89■□□□□ 0.93
RAI1Q7Z5J4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAI1Q7Z5J4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.89■□□□□ 0.93
RAI1Q7Z5J4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RAI1Q7Z5J4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAI1Q7Z5J4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.87■□□□□ 0.93
RAI1Q7Z5J4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAI1Q7Z5J4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAI1Q7Z5J4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAI1Q7Z5J4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.87■□□□□ 0.93
RAI1Q7Z5J4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.87■□□□□ 0.93
RAI1Q7Z5J4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAI1Q7Z5J4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.86■□□□□ 0.93
RAI1Q7Z5J4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAI1Q7Z5J4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAI1Q7Z5J4 AC087393.1-201ENST00000582896 145 ntBASIC20.86■□□□□ 0.93
RAI1Q7Z5J4 AC131212.1-201ENST00000613771 668 ntBASIC20.86■□□□□ 0.93
RAI1Q7Z5J4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI1Q7Z5J4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI1Q7Z5J4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI1Q7Z5J4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI1Q7Z5J4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI1Q7Z5J4 AC019171.1-201ENST00000601251 1056 ntBASIC20.85■□□□□ 0.93
RAI1Q7Z5J4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAI1Q7Z5J4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 AC018755.3-202ENST00000596210 929 ntBASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.84■□□□□ 0.93
RAI1Q7Z5J4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAI1Q7Z5J4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAI1Q7Z5J4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAI1Q7Z5J4 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.83■□□□□ 0.93
RAI1Q7Z5J4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAI1Q7Z5J4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
RAI1Q7Z5J4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.83■□□□□ 0.93
RAI1Q7Z5J4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAI1Q7Z5J4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RAI1Q7Z5J4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RAI1Q7Z5J4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.82■□□□□ 0.92
RAI1Q7Z5J4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAI1Q7Z5J4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAI1Q7Z5J4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.82■□□□□ 0.92
RAI1Q7Z5J4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.82■□□□□ 0.92
RAI1Q7Z5J4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAI1Q7Z5J4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RAI1Q7Z5J4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAI1Q7Z5J4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.81■□□□□ 0.92
RAI1Q7Z5J4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAI1Q7Z5J4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAI1Q7Z5J4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
RAI1Q7Z5J4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.79■□□□□ 0.92
RAI1Q7Z5J4 AL031848.2-201ENST00000607670 837 ntBASIC20.79■□□□□ 0.92
RAI1Q7Z5J4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAI1Q7Z5J4 AC019069.1-201ENST00000610008 1333 ntBASIC20.79■□□□□ 0.92
RAI1Q7Z5J4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RAI1Q7Z5J4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAI1Q7Z5J4 AL449106.1-201ENST00000608517 1980 ntBASIC20.78■□□□□ 0.92
RAI1Q7Z5J4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAI1Q7Z5J4 RPS2P7-201ENST00000447334 885 ntBASIC20.77■□□□□ 0.92
RAI1Q7Z5J4 Z92544.1-202ENST00000571933 1220 ntBASIC20.77■□□□□ 0.92
RAI1Q7Z5J4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.77■□□□□ 0.91
RAI1Q7Z5J4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms