Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.65■■■□□ 2.66
RGPD4Q7Z3J3 AC133561.4-201ENST00000566112 224 ntBASIC31.65■■■□□ 2.66
RGPD4Q7Z3J3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.65■■■□□ 2.66
RGPD4Q7Z3J3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.64■■■□□ 2.66
RGPD4Q7Z3J3 AC026271.2-201ENST00000428091 497 ntBASIC31.64■■■□□ 2.66
RGPD4Q7Z3J3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
RGPD4Q7Z3J3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
RGPD4Q7Z3J3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.63■■■□□ 2.65
RGPD4Q7Z3J3 AC104564.3-201ENST00000582367 638 ntBASIC31.63■■■□□ 2.65
RGPD4Q7Z3J3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.63■■■□□ 2.65
RGPD4Q7Z3J3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.63■■■□□ 2.65
RGPD4Q7Z3J3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.63■■■□□ 2.65
RGPD4Q7Z3J3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.63■■■□□ 2.65
RGPD4Q7Z3J3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RGPD4Q7Z3J3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RGPD4Q7Z3J3 AC096631.2-201ENST00000436136 790 ntBASIC31.62■■■□□ 2.65
RGPD4Q7Z3J3 AL512631.2-201ENST00000604634 923 ntBASIC31.61■■■□□ 2.65
RGPD4Q7Z3J3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
RGPD4Q7Z3J3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
RGPD4Q7Z3J3 MIR4466-201ENST00000606121 54 ntBASIC31.6■■■□□ 2.65
RGPD4Q7Z3J3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RGPD4Q7Z3J3 ZNRF2P3-201ENST00000424200 374 ntBASIC31.59■■■□□ 2.65
RGPD4Q7Z3J3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RGPD4Q7Z3J3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 MIR3621-201ENST00000580529 85 ntBASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 AC092028.1-203ENST00000608262 953 ntBASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 AC005837.3-201ENST00000612163 286 ntBASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
RGPD4Q7Z3J3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.57■■■□□ 2.64
RGPD4Q7Z3J3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.57■■■□□ 2.64
RGPD4Q7Z3J3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.56■■■□□ 2.64
RGPD4Q7Z3J3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RGPD4Q7Z3J3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.56■■■□□ 2.64
RGPD4Q7Z3J3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RGPD4Q7Z3J3 AP002414.2-202ENST00000590929 1450 ntBASIC31.56■■■□□ 2.64
RGPD4Q7Z3J3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RGPD4Q7Z3J3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.56■■■□□ 2.64
RGPD4Q7Z3J3 AC092666.2-201ENST00000613287 246 ntBASIC31.56■■■□□ 2.64
RGPD4Q7Z3J3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.55■■■□□ 2.64
RGPD4Q7Z3J3 MIR4281-201ENST00000580852 62 ntBASIC31.55■■■□□ 2.64
RGPD4Q7Z3J3 MIR6724-1-201ENST00000616420 92 ntBASIC31.55■■■□□ 2.64
RGPD4Q7Z3J3 MIR6724-2-201ENST00000616483 92 ntBASIC31.55■■■□□ 2.64
RGPD4Q7Z3J3 MIR6724-4-201ENST00000617390 92 ntBASIC31.55■■■□□ 2.64
RGPD4Q7Z3J3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.55■■■□□ 2.64
RGPD4Q7Z3J3 MIR6724-3-201ENST00000622482 92 ntBASIC31.55■■■□□ 2.64
RGPD4Q7Z3J3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RGPD4Q7Z3J3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RGPD4Q7Z3J3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RGPD4Q7Z3J3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
RGPD4Q7Z3J3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RGPD4Q7Z3J3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RGPD4Q7Z3J3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.53■■■□□ 2.64
RGPD4Q7Z3J3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RGPD4Q7Z3J3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.53■■■□□ 2.64
RGPD4Q7Z3J3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
RGPD4Q7Z3J3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RGPD4Q7Z3J3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.52■■■□□ 2.64
RGPD4Q7Z3J3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RGPD4Q7Z3J3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
RGPD4Q7Z3J3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
RGPD4Q7Z3J3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RGPD4Q7Z3J3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RGPD4Q7Z3J3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.5■■■□□ 2.63
RGPD4Q7Z3J3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
RGPD4Q7Z3J3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
RGPD4Q7Z3J3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RGPD4Q7Z3J3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
RGPD4Q7Z3J3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RGPD4Q7Z3J3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RGPD4Q7Z3J3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.47■■■□□ 2.63
RGPD4Q7Z3J3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RGPD4Q7Z3J3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.47■■■□□ 2.63
RGPD4Q7Z3J3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
RGPD4Q7Z3J3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RGPD4Q7Z3J3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RGPD4Q7Z3J3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RGPD4Q7Z3J3 KRT18P10-201ENST00000388836 1287 ntBASIC31.45■■■□□ 2.63
RGPD4Q7Z3J3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RGPD4Q7Z3J3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
RGPD4Q7Z3J3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RGPD4Q7Z3J3 AC120024.1-201ENST00000562672 995 ntBASIC31.44■■■□□ 2.62
RGPD4Q7Z3J3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RGPD4Q7Z3J3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
RGPD4Q7Z3J3 AC135279.3-201ENST00000610945 1311 ntBASIC31.44■■■□□ 2.62
RGPD4Q7Z3J3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.43■■■□□ 2.62
RGPD4Q7Z3J3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RGPD4Q7Z3J3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.43■■■□□ 2.62
RGPD4Q7Z3J3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.43■■■□□ 2.62
RGPD4Q7Z3J3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
RGPD4Q7Z3J3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.42■■■□□ 2.62
RGPD4Q7Z3J3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
RGPD4Q7Z3J3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31.42■■■□□ 2.62
RGPD4Q7Z3J3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.42■■■□□ 2.62
RGPD4Q7Z3J3 MTDHP2-201ENST00000601468 714 ntBASIC31.42■■■□□ 2.62
RGPD4Q7Z3J3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.41■■■□□ 2.62
RGPD4Q7Z3J3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.41■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms