Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
PRPF40BQ6NWY9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PRPF40BQ6NWY9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.56■■■□□ 2.48
PRPF40BQ6NWY9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PRPF40BQ6NWY9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.56■■■□□ 2.48
PRPF40BQ6NWY9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PRPF40BQ6NWY9 AC239859.2-201ENST00000444165 318 ntBASIC30.55■■■□□ 2.48
PRPF40BQ6NWY9 AC019171.1-201ENST00000601251 1056 ntBASIC30.55■■■□□ 2.48
PRPF40BQ6NWY9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PRPF40BQ6NWY9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.54■■■□□ 2.48
PRPF40BQ6NWY9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
PRPF40BQ6NWY9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
PRPF40BQ6NWY9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PRPF40BQ6NWY9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.53■■■□□ 2.48
PRPF40BQ6NWY9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
PRPF40BQ6NWY9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PRPF40BQ6NWY9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PRPF40BQ6NWY9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PRPF40BQ6NWY9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.53■■■□□ 2.48
PRPF40BQ6NWY9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PRPF40BQ6NWY9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.52■■■□□ 2.48
PRPF40BQ6NWY9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.51■■■□□ 2.47
PRPF40BQ6NWY9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PRPF40BQ6NWY9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PRPF40BQ6NWY9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
PRPF40BQ6NWY9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.5■■■□□ 2.47
PRPF40BQ6NWY9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PRPF40BQ6NWY9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
PRPF40BQ6NWY9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PRPF40BQ6NWY9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
PRPF40BQ6NWY9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.49■■■□□ 2.47
PRPF40BQ6NWY9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PRPF40BQ6NWY9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
PRPF40BQ6NWY9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.48■■■□□ 2.47
PRPF40BQ6NWY9 AC087393.1-201ENST00000582896 145 ntBASIC30.48■■■□□ 2.47
PRPF40BQ6NWY9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PRPF40BQ6NWY9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
PRPF40BQ6NWY9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.47■■■□□ 2.47
PRPF40BQ6NWY9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PRPF40BQ6NWY9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PRPF40BQ6NWY9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PRPF40BQ6NWY9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
PRPF40BQ6NWY9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.47■■■□□ 2.47
PRPF40BQ6NWY9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PRPF40BQ6NWY9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PRPF40BQ6NWY9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
PRPF40BQ6NWY9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PRPF40BQ6NWY9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PRPF40BQ6NWY9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PRPF40BQ6NWY9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.45■■■□□ 2.47
PRPF40BQ6NWY9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.45■■■□□ 2.47
PRPF40BQ6NWY9 Z92544.1-202ENST00000571933 1220 ntBASIC30.44■■■□□ 2.46
PRPF40BQ6NWY9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.44■■■□□ 2.46
PRPF40BQ6NWY9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
PRPF40BQ6NWY9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
PRPF40BQ6NWY9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
PRPF40BQ6NWY9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
PRPF40BQ6NWY9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.43■■■□□ 2.46
PRPF40BQ6NWY9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
PRPF40BQ6NWY9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PRPF40BQ6NWY9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
PRPF40BQ6NWY9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.42■■■□□ 2.46
PRPF40BQ6NWY9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.42■■■□□ 2.46
PRPF40BQ6NWY9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
PRPF40BQ6NWY9 MIR935-201ENST00000401179 91 ntBASIC30.41■■■□□ 2.46
PRPF40BQ6NWY9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PRPF40BQ6NWY9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PRPF40BQ6NWY9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PRPF40BQ6NWY9 AC008406.3-201ENST00000620001 1374 ntBASIC30.4■■■□□ 2.46
PRPF40BQ6NWY9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.39■■■□□ 2.46
PRPF40BQ6NWY9 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.39■■■□□ 2.46
PRPF40BQ6NWY9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
PRPF40BQ6NWY9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PRPF40BQ6NWY9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.38■■■□□ 2.45
PRPF40BQ6NWY9 LONRF2P2-201ENST00000439212 571 ntBASIC30.38■■■□□ 2.45
PRPF40BQ6NWY9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PRPF40BQ6NWY9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.38■■■□□ 2.45
PRPF40BQ6NWY9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
PRPF40BQ6NWY9 RPS2P7-201ENST00000447334 885 ntBASIC30.37■■■□□ 2.45
PRPF40BQ6NWY9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
PRPF40BQ6NWY9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRPF40BQ6NWY9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRPF40BQ6NWY9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
PRPF40BQ6NWY9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PRPF40BQ6NWY9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PRPF40BQ6NWY9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PRPF40BQ6NWY9 WHAMMP3-201ENST00000611636 1609 ntBASIC30.36■■■□□ 2.45
PRPF40BQ6NWY9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
PRPF40BQ6NWY9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.35■■■□□ 2.45
PRPF40BQ6NWY9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PRPF40BQ6NWY9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
PRPF40BQ6NWY9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PRPF40BQ6NWY9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
PRPF40BQ6NWY9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PRPF40BQ6NWY9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.35■■■□□ 2.45
PRPF40BQ6NWY9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
PRPF40BQ6NWY9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PRPF40BQ6NWY9 BX255925.1-201ENST00000566954 1854 ntBASIC30.34■■■□□ 2.45
PRPF40BQ6NWY9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
PRPF40BQ6NWY9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms