Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PRAMEF9Q5VWM5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.4■■□□□ 1.34
PRAMEF9Q5VWM5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PRAMEF9Q5VWM5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PRAMEF9Q5VWM5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
PRAMEF9Q5VWM5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
PRAMEF9Q5VWM5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PRAMEF9Q5VWM5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.39■■□□□ 1.33
PRAMEF9Q5VWM5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.39■■□□□ 1.33
PRAMEF9Q5VWM5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PRAMEF9Q5VWM5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PRAMEF9Q5VWM5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PRAMEF9Q5VWM5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PRAMEF9Q5VWM5 AC096887.2-201ENST00000623443 1957 ntBASIC23.38■■□□□ 1.33
PRAMEF9Q5VWM5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
PRAMEF9Q5VWM5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.38■■□□□ 1.33
PRAMEF9Q5VWM5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.37■■□□□ 1.33
PRAMEF9Q5VWM5 ECEL1P2-201ENST00000461596 1295 ntBASIC23.37■■□□□ 1.33
PRAMEF9Q5VWM5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.37■■□□□ 1.33
PRAMEF9Q5VWM5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF9Q5VWM5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PRAMEF9Q5VWM5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PRAMEF9Q5VWM5 SMPD5-203ENST00000639008 1464 ntBASIC23.36■■□□□ 1.33
PRAMEF9Q5VWM5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF9Q5VWM5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF9Q5VWM5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF9Q5VWM5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PRAMEF9Q5VWM5 AC020928.2-201ENST00000588717 2197 ntBASIC23.35■■□□□ 1.33
PRAMEF9Q5VWM5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.35■■□□□ 1.33
PRAMEF9Q5VWM5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.35■■□□□ 1.33
PRAMEF9Q5VWM5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PRAMEF9Q5VWM5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PRAMEF9Q5VWM5 GPX1-201ENST00000419349 1106 ntBASIC23.35■■□□□ 1.33
PRAMEF9Q5VWM5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRAMEF9Q5VWM5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PRAMEF9Q5VWM5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRAMEF9Q5VWM5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
PRAMEF9Q5VWM5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PRAMEF9Q5VWM5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.33■■□□□ 1.33
PRAMEF9Q5VWM5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRAMEF9Q5VWM5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRAMEF9Q5VWM5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
PRAMEF9Q5VWM5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PRAMEF9Q5VWM5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PRAMEF9Q5VWM5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PRAMEF9Q5VWM5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF9Q5VWM5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF9Q5VWM5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.32■■□□□ 1.32
PRAMEF9Q5VWM5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF9Q5VWM5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF9Q5VWM5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PRAMEF9Q5VWM5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.31■■□□□ 1.32
PRAMEF9Q5VWM5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF9Q5VWM5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF9Q5VWM5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF9Q5VWM5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF9Q5VWM5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PRAMEF9Q5VWM5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
PRAMEF9Q5VWM5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF9Q5VWM5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.3■■□□□ 1.32
PRAMEF9Q5VWM5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF9Q5VWM5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.3■■□□□ 1.32
PRAMEF9Q5VWM5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF9Q5VWM5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PRAMEF9Q5VWM5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.29■■□□□ 1.32
PRAMEF9Q5VWM5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.29■■□□□ 1.32
PRAMEF9Q5VWM5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.29■■□□□ 1.32
PRAMEF9Q5VWM5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF9Q5VWM5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.28■■□□□ 1.32
PRAMEF9Q5VWM5 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.28■■□□□ 1.32
PRAMEF9Q5VWM5 MIR3960-201ENST00000583311 91 ntBASIC23.28■■□□□ 1.32
PRAMEF9Q5VWM5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.28■■□□□ 1.32
PRAMEF9Q5VWM5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF9Q5VWM5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF9Q5VWM5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF9Q5VWM5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF9Q5VWM5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.27■■□□□ 1.32
PRAMEF9Q5VWM5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.27■■□□□ 1.32
PRAMEF9Q5VWM5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.31
PRAMEF9Q5VWM5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF9Q5VWM5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF9Q5VWM5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PRAMEF9Q5VWM5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF9Q5VWM5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PRAMEF9Q5VWM5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF9Q5VWM5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF9Q5VWM5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
PRAMEF9Q5VWM5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.25■■□□□ 1.31
PRAMEF9Q5VWM5 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.25■■□□□ 1.31
PRAMEF9Q5VWM5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF9Q5VWM5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PRAMEF9Q5VWM5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF9Q5VWM5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PRAMEF9Q5VWM5 RP9P-202ENST00000450133 1212 ntBASIC23.24■■□□□ 1.31
PRAMEF9Q5VWM5 AC007029.1-201ENST00000604183 313 ntBASIC23.24■■□□□ 1.31
PRAMEF9Q5VWM5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRAMEF9Q5VWM5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.24■■□□□ 1.31
PRAMEF9Q5VWM5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.23■■□□□ 1.31
PRAMEF9Q5VWM5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRAMEF9Q5VWM5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms