Protein–RNA interactions for Protein: Q5TKA1

LIN9, Protein lin-9 homolog, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9Q5TKA1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
LIN9Q5TKA1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.21■■□□□ 1.79
LIN9Q5TKA1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
LIN9Q5TKA1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LIN9Q5TKA1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
LIN9Q5TKA1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LIN9Q5TKA1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
LIN9Q5TKA1 DUX4L9-201ENST00000449051 1259 ntBASIC26.19■■□□□ 1.78
LIN9Q5TKA1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.19■■□□□ 1.78
LIN9Q5TKA1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LIN9Q5TKA1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
LIN9Q5TKA1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
LIN9Q5TKA1 RAP2CP1-202ENST00000605179 643 ntBASIC26.18■■□□□ 1.78
LIN9Q5TKA1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.18■■□□□ 1.78
LIN9Q5TKA1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
LIN9Q5TKA1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.18■■□□□ 1.78
LIN9Q5TKA1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.17■■□□□ 1.78
LIN9Q5TKA1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.17■■□□□ 1.78
LIN9Q5TKA1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.17■■□□□ 1.78
LIN9Q5TKA1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LIN9Q5TKA1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.16■■□□□ 1.78
LIN9Q5TKA1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
LIN9Q5TKA1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
LIN9Q5TKA1 BHLHE23-202ENST00000612929 1109 ntBASIC26.16■■□□□ 1.78
LIN9Q5TKA1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.16■■□□□ 1.78
LIN9Q5TKA1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
LIN9Q5TKA1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
LIN9Q5TKA1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LIN9Q5TKA1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LIN9Q5TKA1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LIN9Q5TKA1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.15■■□□□ 1.78
LIN9Q5TKA1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
LIN9Q5TKA1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.15■■□□□ 1.78
LIN9Q5TKA1 AC142472.1-201ENST00000612013 1741 ntBASIC26.14■■□□□ 1.78
LIN9Q5TKA1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.14■■□□□ 1.78
LIN9Q5TKA1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.14■■□□□ 1.78
LIN9Q5TKA1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
LIN9Q5TKA1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LIN9Q5TKA1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
LIN9Q5TKA1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LIN9Q5TKA1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
LIN9Q5TKA1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
LIN9Q5TKA1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.13■■□□□ 1.77
LIN9Q5TKA1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LIN9Q5TKA1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
LIN9Q5TKA1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LIN9Q5TKA1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.12■■□□□ 1.77
LIN9Q5TKA1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LIN9Q5TKA1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.12■■□□□ 1.77
LIN9Q5TKA1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
LIN9Q5TKA1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.11■■□□□ 1.77
LIN9Q5TKA1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.11■■□□□ 1.77
LIN9Q5TKA1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
LIN9Q5TKA1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.11■■□□□ 1.77
LIN9Q5TKA1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LIN9Q5TKA1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LIN9Q5TKA1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
LIN9Q5TKA1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LIN9Q5TKA1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
LIN9Q5TKA1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LIN9Q5TKA1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LIN9Q5TKA1 SPCS2P3-201ENST00000500401 656 ntBASIC26.09■■□□□ 1.77
LIN9Q5TKA1 AC139795.1-202ENST00000500444 432 ntBASIC26.09■■□□□ 1.77
LIN9Q5TKA1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
LIN9Q5TKA1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.09■■□□□ 1.77
LIN9Q5TKA1 MIR6765-201ENST00000614092 87 ntBASIC26.09■■□□□ 1.77
LIN9Q5TKA1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
LIN9Q5TKA1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LIN9Q5TKA1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
LIN9Q5TKA1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.08■■□□□ 1.77
LIN9Q5TKA1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
LIN9Q5TKA1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LIN9Q5TKA1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.07■■□□□ 1.76
LIN9Q5TKA1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LIN9Q5TKA1 AC018755.3-202ENST00000596210 929 ntBASIC26.07■■□□□ 1.76
LIN9Q5TKA1 AC074183.2-201ENST00000623112 922 ntBASIC26.07■■□□□ 1.76
LIN9Q5TKA1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LIN9Q5TKA1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.07■■□□□ 1.76
LIN9Q5TKA1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LIN9Q5TKA1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LIN9Q5TKA1 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.06■■□□□ 1.76
LIN9Q5TKA1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LIN9Q5TKA1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LIN9Q5TKA1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
LIN9Q5TKA1 AC091060.1-201ENST00000623524 1766 ntBASIC26.05■■□□□ 1.76
LIN9Q5TKA1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.05■■□□□ 1.76
LIN9Q5TKA1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LIN9Q5TKA1 AC010980.1-201ENST00000587192 1142 ntBASIC26.05■■□□□ 1.76
LIN9Q5TKA1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 AL359504.2-201ENST00000605506 1601 ntBASIC26.04■■□□□ 1.76
LIN9Q5TKA1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
LIN9Q5TKA1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms