Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.01■■□□□ 1.91
TRIM60Q495X7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TRIM60Q495X7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TRIM60Q495X7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27■■□□□ 1.91
TRIM60Q495X7 AL139246.5-201ENST00000606645 996 ntBASIC27■■□□□ 1.91
TRIM60Q495X7 RALB-208ENST00000631312 311 ntTSL 5 BASIC27■■□□□ 1.91
TRIM60Q495X7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27■■□□□ 1.91
TRIM60Q495X7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27■■□□□ 1.91
TRIM60Q495X7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
TRIM60Q495X7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM60Q495X7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.99■■□□□ 1.91
TRIM60Q495X7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.99■■□□□ 1.91
TRIM60Q495X7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM60Q495X7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM60Q495X7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.98■■□□□ 1.91
TRIM60Q495X7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRIM60Q495X7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRIM60Q495X7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
TRIM60Q495X7 AC022616.5-201ENST00000518796 181 ntBASIC26.97■■□□□ 1.91
TRIM60Q495X7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.97■■□□□ 1.91
TRIM60Q495X7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.97■■□□□ 1.91
TRIM60Q495X7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.97■■□□□ 1.91
TRIM60Q495X7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.96■■□□□ 1.91
TRIM60Q495X7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRIM60Q495X7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.96■■□□□ 1.91
TRIM60Q495X7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRIM60Q495X7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.95■■□□□ 1.91
TRIM60Q495X7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM60Q495X7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM60Q495X7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM60Q495X7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM60Q495X7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM60Q495X7 KRT18P24-201ENST00000344739 1156 ntBASIC26.94■■□□□ 1.9
TRIM60Q495X7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM60Q495X7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM60Q495X7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
TRIM60Q495X7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.93■■□□□ 1.9
TRIM60Q495X7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.93■■□□□ 1.9
TRIM60Q495X7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM60Q495X7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.93■■□□□ 1.9
TRIM60Q495X7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM60Q495X7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM60Q495X7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.92■■□□□ 1.9
TRIM60Q495X7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.92■■□□□ 1.9
TRIM60Q495X7 AC131281.2-201ENST00000520478 145 ntBASIC26.92■■□□□ 1.9
TRIM60Q495X7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.92■■□□□ 1.9
TRIM60Q495X7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM60Q495X7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.92■■□□□ 1.9
TRIM60Q495X7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.91■■□□□ 1.9
TRIM60Q495X7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
TRIM60Q495X7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TRIM60Q495X7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TRIM60Q495X7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
TRIM60Q495X7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.91■■□□□ 1.9
TRIM60Q495X7 AC137630.3-201ENST00000607245 391 ntBASIC26.91■■□□□ 1.9
TRIM60Q495X7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
TRIM60Q495X7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM60Q495X7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.9■■□□□ 1.9
TRIM60Q495X7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.9■■□□□ 1.9
TRIM60Q495X7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.9■■□□□ 1.9
TRIM60Q495X7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TRIM60Q495X7 AC021242.3-201ENST00000607598 1377 ntBASIC26.89■■□□□ 1.9
TRIM60Q495X7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.89■■□□□ 1.9
TRIM60Q495X7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TRIM60Q495X7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
TRIM60Q495X7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.87■■□□□ 1.89
TRIM60Q495X7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM60Q495X7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.87■■□□□ 1.89
TRIM60Q495X7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM60Q495X7 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.87■■□□□ 1.89
TRIM60Q495X7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM60Q495X7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
TRIM60Q495X7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM60Q495X7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM60Q495X7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM60Q495X7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM60Q495X7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM60Q495X7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.86■■□□□ 1.89
TRIM60Q495X7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.86■■□□□ 1.89
TRIM60Q495X7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
TRIM60Q495X7 AL136116.3-201ENST00000402907 1138 ntBASIC26.85■■□□□ 1.89
TRIM60Q495X7 AC120024.1-201ENST00000562672 995 ntBASIC26.85■■□□□ 1.89
TRIM60Q495X7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
TRIM60Q495X7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM60Q495X7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
TRIM60Q495X7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.84■■□□□ 1.89
TRIM60Q495X7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
TRIM60Q495X7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.84■■□□□ 1.89
TRIM60Q495X7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.84■■□□□ 1.89
TRIM60Q495X7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.84■■□□□ 1.89
TRIM60Q495X7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.84■■□□□ 1.89
TRIM60Q495X7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM60Q495X7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
TRIM60Q495X7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TRIM60Q495X7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.83■■□□□ 1.89
TRIM60Q495X7 AC092028.1-203ENST00000608262 953 ntBASIC26.83■■□□□ 1.89
TRIM60Q495X7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TRIM60Q495X7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRIM60Q495X7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRIM60Q495X7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms