Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRFAM7AQ494W8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.91■□□□□ 0.94
CHRFAM7AQ494W8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRFAM7AQ494W8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
CHRFAM7AQ494W8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRFAM7AQ494W8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 AC092803.2-201ENST00000564287 1899 ntBASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 ECEL1P2-201ENST00000461596 1295 ntBASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 AC092296.2-201ENST00000589470 999 ntBASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 AP004609.3-201ENST00000610705 1884 ntBASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 AC110285.7-201ENST00000624417 1536 ntBASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 DUSP8P4-201ENST00000399538 1761 ntBASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRFAM7AQ494W8 AC126177.7-201ENST00000547904 679 ntBASIC20.86■□□□□ 0.93
CHRFAM7AQ494W8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHRFAM7AQ494W8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRFAM7AQ494W8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRFAM7AQ494W8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRFAM7AQ494W8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRFAM7AQ494W8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRFAM7AQ494W8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CHRFAM7AQ494W8 MIR219A2-201ENST00000608502 1504 ntBASIC20.83■□□□□ 0.92
CHRFAM7AQ494W8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 AL035685.1-201ENST00000636663 812 ntBASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms