Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.02■□□□□ 0.96
SNAI3Q3KNW1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SNAI3Q3KNW1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.02■□□□□ 0.95
SNAI3Q3KNW1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNAI3Q3KNW1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNAI3Q3KNW1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SNAI3Q3KNW1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.01■□□□□ 0.95
SNAI3Q3KNW1 AC092296.2-201ENST00000589470 999 ntBASIC21.01■□□□□ 0.95
SNAI3Q3KNW1 AC022413.1-201ENST00000624602 984 ntBASIC21.01■□□□□ 0.95
SNAI3Q3KNW1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNAI3Q3KNW1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.01■□□□□ 0.95
SNAI3Q3KNW1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAI3Q3KNW1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SNAI3Q3KNW1 AC020928.2-201ENST00000588717 2197 ntBASIC21■□□□□ 0.95
SNAI3Q3KNW1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21■□□□□ 0.95
SNAI3Q3KNW1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAI3Q3KNW1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAI3Q3KNW1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21■□□□□ 0.95
SNAI3Q3KNW1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAI3Q3KNW1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAI3Q3KNW1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SNAI3Q3KNW1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAI3Q3KNW1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21■□□□□ 0.95
SNAI3Q3KNW1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 AC025884.2-201ENST00000553429 711 ntBASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNAI3Q3KNW1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SNAI3Q3KNW1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.98■□□□□ 0.95
SNAI3Q3KNW1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNAI3Q3KNW1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNAI3Q3KNW1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAI3Q3KNW1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.97■□□□□ 0.95
SNAI3Q3KNW1 AC096887.2-201ENST00000623443 1957 ntBASIC20.97■□□□□ 0.95
SNAI3Q3KNW1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SNAI3Q3KNW1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SNAI3Q3KNW1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNAI3Q3KNW1 SMPD5-203ENST00000639008 1464 ntBASIC20.95■□□□□ 0.94
SNAI3Q3KNW1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNAI3Q3KNW1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNAI3Q3KNW1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNAI3Q3KNW1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNAI3Q3KNW1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNAI3Q3KNW1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SNAI3Q3KNW1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.93■□□□□ 0.94
SNAI3Q3KNW1 ECEL1P2-201ENST00000461596 1295 ntBASIC20.93■□□□□ 0.94
SNAI3Q3KNW1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.93■□□□□ 0.94
SNAI3Q3KNW1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.93■□□□□ 0.94
SNAI3Q3KNW1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 MIR3960-201ENST00000583311 91 ntBASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAI3Q3KNW1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNAI3Q3KNW1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNAI3Q3KNW1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNAI3Q3KNW1 GPX1-201ENST00000419349 1106 ntBASIC20.91■□□□□ 0.94
SNAI3Q3KNW1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNAI3Q3KNW1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNAI3Q3KNW1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.9■□□□□ 0.94
SNAI3Q3KNW1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SNAI3Q3KNW1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNAI3Q3KNW1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNAI3Q3KNW1 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.89■□□□□ 0.93
SNAI3Q3KNW1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SNAI3Q3KNW1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SNAI3Q3KNW1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNAI3Q3KNW1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SNAI3Q3KNW1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SNAI3Q3KNW1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNAI3Q3KNW1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNAI3Q3KNW1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SNAI3Q3KNW1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNAI3Q3KNW1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.87■□□□□ 0.93
SNAI3Q3KNW1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
SNAI3Q3KNW1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.86■□□□□ 0.93
SNAI3Q3KNW1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAI3Q3KNW1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAI3Q3KNW1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.86■□□□□ 0.93
SNAI3Q3KNW1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.86■□□□□ 0.93
SNAI3Q3KNW1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms